Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.51■■□□□ 1.03
ZNF546Q86UE3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF546Q86UE3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF546Q86UE3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF546Q86UE3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF546Q86UE3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF546Q86UE3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF546Q86UE3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
ZNF546Q86UE3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZNF546Q86UE3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF546Q86UE3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF546Q86UE3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF546Q86UE3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF546Q86UE3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF546Q86UE3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF546Q86UE3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF546Q86UE3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF546Q86UE3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF546Q86UE3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF546Q86UE3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF546Q86UE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF546Q86UE3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF546Q86UE3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ZNF546Q86UE3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF546Q86UE3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF546Q86UE3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF546Q86UE3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF546Q86UE3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF546Q86UE3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF546Q86UE3 BX255925.1-201ENST00000566954 1854 ntBASIC21.43■■□□□ 1.02
ZNF546Q86UE3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF546Q86UE3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF546Q86UE3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF546Q86UE3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF546Q86UE3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ZNF546Q86UE3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF546Q86UE3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF546Q86UE3 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.4■■□□□ 1.02
ZNF546Q86UE3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF546Q86UE3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF546Q86UE3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF546Q86UE3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.39■■□□□ 1.01
ZNF546Q86UE3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZNF546Q86UE3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZNF546Q86UE3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF546Q86UE3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF546Q86UE3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.38■■□□□ 1.01
ZNF546Q86UE3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF546Q86UE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.37■■□□□ 1.01
ZNF546Q86UE3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF546Q86UE3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
ZNF546Q86UE3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF546Q86UE3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
ZNF546Q86UE3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF546Q86UE3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF546Q86UE3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF546Q86UE3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.34■■□□□ 1.01
ZNF546Q86UE3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF546Q86UE3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF546Q86UE3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF546Q86UE3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.33■■□□□ 1.01
ZNF546Q86UE3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.33■■□□□ 1
ZNF546Q86UE3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF546Q86UE3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF546Q86UE3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF546Q86UE3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF546Q86UE3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF546Q86UE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF546Q86UE3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF546Q86UE3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF546Q86UE3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ZNF546Q86UE3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.3■■□□□ 1
ZNF546Q86UE3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF546Q86UE3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF546Q86UE3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.3■■□□□ 1
ZNF546Q86UE3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
ZNF546Q86UE3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF546Q86UE3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF546Q86UE3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
ZNF546Q86UE3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF546Q86UE3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF546Q86UE3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.27■■□□□ 1
ZNF546Q86UE3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.27■■□□□ 1
ZNF546Q86UE3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
ZNF546Q86UE3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.27■■□□□ 1
ZNF546Q86UE3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF546Q86UE3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF546Q86UE3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.26■□□□□ 0.99
ZNF546Q86UE3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF546Q86UE3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms