Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.11■□□□□ 0.97
C9orf139Q6ZV77 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf139Q6ZV77 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf139Q6ZV77 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf139Q6ZV77 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
C9orf139Q6ZV77 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf139Q6ZV77 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
C9orf139Q6ZV77 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
C9orf139Q6ZV77 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
C9orf139Q6ZV77 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf139Q6ZV77 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.07■□□□□ 0.96
C9orf139Q6ZV77 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf139Q6ZV77 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
C9orf139Q6ZV77 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf139Q6ZV77 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf139Q6ZV77 HSD17B1P1-201ENST00000590052 955 ntBASIC21.06■□□□□ 0.96
C9orf139Q6ZV77 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf139Q6ZV77 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf139Q6ZV77 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf139Q6ZV77 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf139Q6ZV77 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf139Q6ZV77 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.02■□□□□ 0.96
C9orf139Q6ZV77 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C9orf139Q6ZV77 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
C9orf139Q6ZV77 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C9orf139Q6ZV77 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.01■□□□□ 0.95
C9orf139Q6ZV77 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
C9orf139Q6ZV77 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C9orf139Q6ZV77 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.99■□□□□ 0.95
C9orf139Q6ZV77 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.99■□□□□ 0.95
C9orf139Q6ZV77 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C9orf139Q6ZV77 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
C9orf139Q6ZV77 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.98■□□□□ 0.95
C9orf139Q6ZV77 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C9orf139Q6ZV77 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf139Q6ZV77 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.97■□□□□ 0.95
C9orf139Q6ZV77 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.97■□□□□ 0.95
C9orf139Q6ZV77 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
C9orf139Q6ZV77 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.97■□□□□ 0.95
C9orf139Q6ZV77 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
C9orf139Q6ZV77 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf139Q6ZV77 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
C9orf139Q6ZV77 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf139Q6ZV77 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
C9orf139Q6ZV77 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.94■□□□□ 0.94
C9orf139Q6ZV77 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.94■□□□□ 0.94
C9orf139Q6ZV77 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 AC127502.1-201ENST00000399971 1502 ntBASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
C9orf139Q6ZV77 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf139Q6ZV77 AL135925.1-201ENST00000605920 1701 ntBASIC20.92■□□□□ 0.94
C9orf139Q6ZV77 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf139Q6ZV77 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.91■□□□□ 0.94
C9orf139Q6ZV77 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf139Q6ZV77 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf139Q6ZV77 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf139Q6ZV77 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf139Q6ZV77 AC135983.2-203ENST00000454486 1613 ntBASIC20.89■□□□□ 0.94
C9orf139Q6ZV77 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf139Q6ZV77 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf139Q6ZV77 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.89■□□□□ 0.93
C9orf139Q6ZV77 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
C9orf139Q6ZV77 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf139Q6ZV77 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.88■□□□□ 0.93
C9orf139Q6ZV77 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf139Q6ZV77 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf139Q6ZV77 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf139Q6ZV77 AC008813.1-201ENST00000536597 885 ntBASIC20.87■□□□□ 0.93
C9orf139Q6ZV77 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
C9orf139Q6ZV77 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.86■□□□□ 0.93
C9orf139Q6ZV77 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C9orf139Q6ZV77 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms