Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00336Q6ZUF6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00336Q6ZUF6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC00336Q6ZUF6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00336Q6ZUF6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 AC022413.1-201ENST00000624602 984 ntBASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00336Q6ZUF6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00336Q6ZUF6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00336Q6ZUF6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00336Q6ZUF6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00336Q6ZUF6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.46■□□□□ 0.39
LINC00336Q6ZUF6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LINC00336Q6ZUF6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00336Q6ZUF6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LINC00336Q6ZUF6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00336Q6ZUF6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00336Q6ZUF6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00336Q6ZUF6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00336Q6ZUF6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.42■□□□□ 0.38
LINC00336Q6ZUF6 AC018358.1-201ENST00000631079 1402 ntBASIC17.41■□□□□ 0.38
LINC00336Q6ZUF6 AC008813.1-201ENST00000536597 885 ntBASIC17.41■□□□□ 0.38
LINC00336Q6ZUF6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00336Q6ZUF6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00336Q6ZUF6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00336Q6ZUF6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LINC00336Q6ZUF6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC00336Q6ZUF6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC00336Q6ZUF6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINC00336Q6ZUF6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00336Q6ZUF6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00336Q6ZUF6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00336Q6ZUF6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00336Q6ZUF6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00336Q6ZUF6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00336Q6ZUF6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00336Q6ZUF6 LINC00273-201ENST00000539813 1452 ntBASIC17.37■□□□□ 0.37
LINC00336Q6ZUF6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC00336Q6ZUF6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LINC00336Q6ZUF6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00336Q6ZUF6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00336Q6ZUF6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC00336Q6ZUF6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC00336Q6ZUF6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 AL033527.3-201ENST00000566366 1196 ntBASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC00336Q6ZUF6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00336Q6ZUF6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00336Q6ZUF6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC00336Q6ZUF6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC00336Q6ZUF6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00336Q6ZUF6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00336Q6ZUF6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINC00336Q6ZUF6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00336Q6ZUF6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LINC00336Q6ZUF6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00336Q6ZUF6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00336Q6ZUF6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00336Q6ZUF6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00336Q6ZUF6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00336Q6ZUF6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00336Q6ZUF6 TSPY13P-201ENST00000338964 914 ntBASIC17.29■□□□□ 0.36
LINC00336Q6ZUF6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00336Q6ZUF6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00336Q6ZUF6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00336Q6ZUF6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00336Q6ZUF6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.28■□□□□ 0.36
LINC00336Q6ZUF6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00336Q6ZUF6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00336Q6ZUF6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00336Q6ZUF6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00336Q6ZUF6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC00336Q6ZUF6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
LINC00336Q6ZUF6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00336Q6ZUF6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC00336Q6ZUF6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC00336Q6ZUF6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
LINC00336Q6ZUF6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00336Q6ZUF6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00336Q6ZUF6 U85056.1-201ENST00000616429 682 ntBASIC17.25■□□□□ 0.35
LINC00336Q6ZUF6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00336Q6ZUF6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LINC00336Q6ZUF6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00336Q6ZUF6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00336Q6ZUF6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00336Q6ZUF6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00336Q6ZUF6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LINC00336Q6ZUF6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00336Q6ZUF6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC00336Q6ZUF6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00336Q6ZUF6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms