Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT3Q6P1A2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT3Q6P1A2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LPCAT3Q6P1A2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LPCAT3Q6P1A2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
LPCAT3Q6P1A2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT3Q6P1A2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT3Q6P1A2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT3Q6P1A2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.72■■□□□ 1.07
LPCAT3Q6P1A2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.72■■□□□ 1.07
LPCAT3Q6P1A2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT3Q6P1A2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT3Q6P1A2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT3Q6P1A2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 WASH5P-204ENST00000632292 975 ntBASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.7■■□□□ 1.06
LPCAT3Q6P1A2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT3Q6P1A2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LPCAT3Q6P1A2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT3Q6P1A2 AP002365.1-201ENST00000603448 772 ntBASIC21.68■■□□□ 1.06
LPCAT3Q6P1A2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LPCAT3Q6P1A2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT3Q6P1A2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT3Q6P1A2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT3Q6P1A2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT3Q6P1A2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LPCAT3Q6P1A2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT3Q6P1A2 BX255925.1-201ENST00000566954 1854 ntBASIC21.66■■□□□ 1.06
LPCAT3Q6P1A2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT3Q6P1A2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.66■■□□□ 1.06
LPCAT3Q6P1A2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.65■■□□□ 1.06
LPCAT3Q6P1A2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.65■■□□□ 1.06
LPCAT3Q6P1A2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LPCAT3Q6P1A2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT3Q6P1A2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT3Q6P1A2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LPCAT3Q6P1A2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LPCAT3Q6P1A2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
LPCAT3Q6P1A2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT3Q6P1A2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT3Q6P1A2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.62■■□□□ 1.05
LPCAT3Q6P1A2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LPCAT3Q6P1A2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT3Q6P1A2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.61■■□□□ 1.05
LPCAT3Q6P1A2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
LPCAT3Q6P1A2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.61■■□□□ 1.05
LPCAT3Q6P1A2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.6■■□□□ 1.05
LPCAT3Q6P1A2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT3Q6P1A2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LPCAT3Q6P1A2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT3Q6P1A2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT3Q6P1A2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LPCAT3Q6P1A2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT3Q6P1A2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT3Q6P1A2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT3Q6P1A2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT3Q6P1A2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
LPCAT3Q6P1A2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT3Q6P1A2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
LPCAT3Q6P1A2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LPCAT3Q6P1A2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT3Q6P1A2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LPCAT3Q6P1A2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LPCAT3Q6P1A2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.57■■□□□ 1.04
LPCAT3Q6P1A2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LPCAT3Q6P1A2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT3Q6P1A2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT3Q6P1A2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT3Q6P1A2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LPCAT3Q6P1A2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 AC010864.1-201ENST00000609407 1511 ntBASIC21.55■■□□□ 1.04
LPCAT3Q6P1A2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 AL449106.1-201ENST00000608517 1980 ntBASIC21.54■■□□□ 1.04
LPCAT3Q6P1A2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT3Q6P1A2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT3Q6P1A2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.53■■□□□ 1.04
LPCAT3Q6P1A2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LPCAT3Q6P1A2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LPCAT3Q6P1A2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LPCAT3Q6P1A2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms