Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NIPAL1Q6NVV3 ST7-AS1-201ENST00000456775 1889 ntBASIC24.79■■□□□ 1.56
NIPAL1Q6NVV3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.78■■□□□ 1.56
NIPAL1Q6NVV3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.78■■□□□ 1.56
NIPAL1Q6NVV3 AC135731.1-201ENST00000569415 2548 ntBASIC24.77■■□□□ 1.56
NIPAL1Q6NVV3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.77■■□□□ 1.56
NIPAL1Q6NVV3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
NIPAL1Q6NVV3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
NIPAL1Q6NVV3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NIPAL1Q6NVV3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.75■■□□□ 1.55
NIPAL1Q6NVV3 DUX4L29-201ENST00000425409 679 ntBASIC24.74■■□□□ 1.55
NIPAL1Q6NVV3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NIPAL1Q6NVV3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
NIPAL1Q6NVV3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NIPAL1Q6NVV3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NIPAL1Q6NVV3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
NIPAL1Q6NVV3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.72■■□□□ 1.55
NIPAL1Q6NVV3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NIPAL1Q6NVV3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NIPAL1Q6NVV3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
NIPAL1Q6NVV3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NIPAL1Q6NVV3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NIPAL1Q6NVV3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.71■■□□□ 1.55
NIPAL1Q6NVV3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NIPAL1Q6NVV3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
NIPAL1Q6NVV3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
NIPAL1Q6NVV3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.7■■□□□ 1.54
NIPAL1Q6NVV3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.7■■□□□ 1.54
NIPAL1Q6NVV3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.7■■□□□ 1.54
NIPAL1Q6NVV3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NIPAL1Q6NVV3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NIPAL1Q6NVV3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NIPAL1Q6NVV3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
NIPAL1Q6NVV3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NIPAL1Q6NVV3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPAL1Q6NVV3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NIPAL1Q6NVV3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NIPAL1Q6NVV3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
NIPAL1Q6NVV3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NIPAL1Q6NVV3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.65■■□□□ 1.54
NIPAL1Q6NVV3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.64■■□□□ 1.54
NIPAL1Q6NVV3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
NIPAL1Q6NVV3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
NIPAL1Q6NVV3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
NIPAL1Q6NVV3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 AC021231.2-201ENST00000594613 730 ntBASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NIPAL1Q6NVV3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NIPAL1Q6NVV3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
NIPAL1Q6NVV3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
NIPAL1Q6NVV3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.62■■□□□ 1.53
NIPAL1Q6NVV3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
NIPAL1Q6NVV3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPAL1Q6NVV3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPAL1Q6NVV3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NIPAL1Q6NVV3 AC127502.1-201ENST00000399971 1502 ntBASIC24.61■■□□□ 1.53
NIPAL1Q6NVV3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPAL1Q6NVV3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NIPAL1Q6NVV3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NIPAL1Q6NVV3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.6■■□□□ 1.53
NIPAL1Q6NVV3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
NIPAL1Q6NVV3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NIPAL1Q6NVV3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NIPAL1Q6NVV3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
NIPAL1Q6NVV3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
NIPAL1Q6NVV3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
NIPAL1Q6NVV3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NIPAL1Q6NVV3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NIPAL1Q6NVV3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
NIPAL1Q6NVV3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 ABHD17AP4-201ENST00000411545 909 ntBASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 LINC00273-201ENST00000539813 1452 ntBASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NIPAL1Q6NVV3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NIPAL1Q6NVV3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
NIPAL1Q6NVV3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NIPAL1Q6NVV3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.55■■□□□ 1.52
NIPAL1Q6NVV3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.55■■□□□ 1.52
NIPAL1Q6NVV3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
NIPAL1Q6NVV3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NIPAL1Q6NVV3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms