Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BCAR1P56945 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.26■■■□□ 2.11
BCAR1P56945 HSD17B1P1-201ENST00000590052 955 ntBASIC28.26■■■□□ 2.11
BCAR1P56945 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BCAR1P56945 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
BCAR1P56945 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.24■■■□□ 2.11
BCAR1P56945 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.24■■■□□ 2.11
BCAR1P56945 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
BCAR1P56945 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.23■■■□□ 2.11
BCAR1P56945 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
BCAR1P56945 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.22■■■□□ 2.11
BCAR1P56945 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
BCAR1P56945 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
BCAR1P56945 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.2■■■□□ 2.11
BCAR1P56945 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BCAR1P56945 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
BCAR1P56945 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.2■■■□□ 2.1
BCAR1P56945 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
BCAR1P56945 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.19■■■□□ 2.1
BCAR1P56945 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
BCAR1P56945 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.18■■■□□ 2.1
BCAR1P56945 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
BCAR1P56945 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BCAR1P56945 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BCAR1P56945 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
BCAR1P56945 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
BCAR1P56945 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BCAR1P56945 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.15■■■□□ 2.1
BCAR1P56945 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.15■■■□□ 2.1
BCAR1P56945 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BCAR1P56945 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.15■■■□□ 2.1
BCAR1P56945 AC010864.1-201ENST00000609407 1511 ntBASIC28.14■■■□□ 2.1
BCAR1P56945 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
BCAR1P56945 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.14■■■□□ 2.09
BCAR1P56945 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
BCAR1P56945 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
BCAR1P56945 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.12■■■□□ 2.09
BCAR1P56945 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BCAR1P56945 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.11■■■□□ 2.09
BCAR1P56945 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BCAR1P56945 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
BCAR1P56945 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
BCAR1P56945 LINC00273-201ENST00000539813 1452 ntBASIC28.1■■■□□ 2.09
BCAR1P56945 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BCAR1P56945 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.09■■■□□ 2.09
BCAR1P56945 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.09■■■□□ 2.09
BCAR1P56945 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BCAR1P56945 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
BCAR1P56945 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.09■■■□□ 2.09
BCAR1P56945 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
BCAR1P56945 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
BCAR1P56945 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
BCAR1P56945 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
BCAR1P56945 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
BCAR1P56945 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.07■■■□□ 2.08
BCAR1P56945 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
BCAR1P56945 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
BCAR1P56945 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
BCAR1P56945 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.06■■■□□ 2.08
BCAR1P56945 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
BCAR1P56945 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.06■■■□□ 2.08
BCAR1P56945 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.06■■■□□ 2.08
BCAR1P56945 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
BCAR1P56945 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
BCAR1P56945 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.05■■■□□ 2.08
BCAR1P56945 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
BCAR1P56945 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.04■■■□□ 2.08
BCAR1P56945 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
BCAR1P56945 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.03■■■□□ 2.08
BCAR1P56945 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
BCAR1P56945 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.02■■■□□ 2.08
BCAR1P56945 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
BCAR1P56945 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.01■■■□□ 2.07
BCAR1P56945 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
BCAR1P56945 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
BCAR1P56945 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.98■■■□□ 2.07
BCAR1P56945 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.98■■■□□ 2.07
BCAR1P56945 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.97■■■□□ 2.07
BCAR1P56945 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
BCAR1P56945 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.96■■■□□ 2.07
BCAR1P56945 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.96■■■□□ 2.07
BCAR1P56945 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
BCAR1P56945 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
BCAR1P56945 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
BCAR1P56945 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
BCAR1P56945 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
BCAR1P56945 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
BCAR1P56945 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.94■■■□□ 2.06
BCAR1P56945 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
BCAR1P56945 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
BCAR1P56945 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
BCAR1P56945 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
BCAR1P56945 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms