Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.34■□□□□ 0.69
CMC4P56277 AC021231.2-201ENST00000594613 730 ntBASIC19.34■□□□□ 0.69
CMC4P56277 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CMC4P56277 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CMC4P56277 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CMC4P56277 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CMC4P56277 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CMC4P56277 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMC4P56277 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.32■□□□□ 0.68
CMC4P56277 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMC4P56277 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMC4P56277 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMC4P56277 ABHD17AP4-201ENST00000411545 909 ntBASIC19.31■□□□□ 0.68
CMC4P56277 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.31■□□□□ 0.68
CMC4P56277 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMC4P56277 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CMC4P56277 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CMC4P56277 AC127502.1-201ENST00000399971 1502 ntBASIC19.3■□□□□ 0.68
CMC4P56277 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMC4P56277 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMC4P56277 AP004833.2-201ENST00000532228 1454 ntBASIC19.29■□□□□ 0.68
CMC4P56277 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMC4P56277 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMC4P56277 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.28■□□□□ 0.68
CMC4P56277 LINC00273-201ENST00000539813 1452 ntBASIC19.28■□□□□ 0.68
CMC4P56277 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CMC4P56277 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CMC4P56277 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CMC4P56277 ZNRF2P2-203ENST00000454624 420 ntBASIC19.26■□□□□ 0.67
CMC4P56277 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CMC4P56277 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.26■□□□□ 0.67
CMC4P56277 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.26■□□□□ 0.67
CMC4P56277 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CMC4P56277 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CMC4P56277 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CMC4P56277 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CMC4P56277 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.25■□□□□ 0.67
CMC4P56277 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CMC4P56277 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CMC4P56277 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.24■□□□□ 0.67
CMC4P56277 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CMC4P56277 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.24■□□□□ 0.67
CMC4P56277 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CMC4P56277 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CMC4P56277 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CMC4P56277 LINC01971-201ENST00000617888 1048 ntBASIC19.23■□□□□ 0.67
CMC4P56277 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CMC4P56277 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CMC4P56277 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CMC4P56277 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CMC4P56277 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CMC4P56277 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.22■□□□□ 0.67
CMC4P56277 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.21■□□□□ 0.67
CMC4P56277 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CMC4P56277 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CMC4P56277 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CMC4P56277 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CMC4P56277 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.19■□□□□ 0.66
CMC4P56277 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CMC4P56277 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CMC4P56277 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CMC4P56277 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.18■□□□□ 0.66
CMC4P56277 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CMC4P56277 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CMC4P56277 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CMC4P56277 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CMC4P56277 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CMC4P56277 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CMC4P56277 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CMC4P56277 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CMC4P56277 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.16■□□□□ 0.66
CMC4P56277 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CMC4P56277 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CMC4P56277 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
CMC4P56277 AC135983.2-203ENST00000454486 1613 ntBASIC19.15■□□□□ 0.66
CMC4P56277 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CMC4P56277 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.15■□□□□ 0.66
CMC4P56277 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.15■□□□□ 0.66
CMC4P56277 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CMC4P56277 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CMC4P56277 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.14■□□□□ 0.66
CMC4P56277 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CMC4P56277 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CMC4P56277 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CMC4P56277 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.14■□□□□ 0.65
CMC4P56277 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.14■□□□□ 0.65
CMC4P56277 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CMC4P56277 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CMC4P56277 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMC4P56277 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMC4P56277 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMC4P56277 MIR7108-201ENST00000614319 87 ntBASIC19.13■□□□□ 0.65
CMC4P56277 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.13■□□□□ 0.65
CMC4P56277 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CMC4P56277 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CMC4P56277 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CMC4P56277 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.12■□□□□ 0.65
CMC4P56277 DUX4L11-201ENST00000611504 1267 ntBASIC19.12■□□□□ 0.65
CMC4P56277 DUX4L12-201ENST00000614593 1267 ntBASIC19.12■□□□□ 0.65
CMC4P56277 DUX4L14-201ENST00000621227 1267 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms