Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 CWP2YKL096W-A 279 nt9.18□□□□□ -0.94
RPN3P40016 SRP54YPR088C 1626 nt9.18□□□□□ -0.94
RPN3P40016 ENO1YGR254W 1314 nt9.17□□□□□ -0.94
RPN3P40016 SAN1YDR143C 1833 nt9.17□□□□□ -0.94
RPN3P40016 KRR1YCL059C 951 nt9.16□□□□□ -0.94
RPN3P40016 FRE6YLL051C 2139 nt9.16□□□□□ -0.94
RPN3P40016 SSL2YIL143C 2532 nt9.15□□□□□ -0.94
RPN3P40016 SRP102YKL154W 735 nt9.15□□□□□ -0.94
RPN3P40016 HSL7YBR133C 2484 nt9.15□□□□□ -0.94
RPN3P40016 HTS1YPR033C 1641 nt9.14□□□□□ -0.95
RPN3P40016 SOD2YHR008C 702 nt9.14□□□□□ -0.95
RPN3P40016 PAB1YER165W 1734 nt9.14□□□□□ -0.95
RPN3P40016 KGD2YDR148C 1392 nt9.13□□□□□ -0.95
RPN3P40016 YLR122CYLR122C 378 nt9.13□□□□□ -0.95
RPN3P40016 RIM2YBR192W 1134 nt9.13□□□□□ -0.95
RPN3P40016 ERG6YML008C 1152 nt9.12□□□□□ -0.95
RPN3P40016 YPT11YNL304W 1254 nt9.12□□□□□ -0.95
RPN3P40016 YLR280CYLR280C 351 nt9.11□□□□□ -0.95
RPN3P40016 ERO1YML130C 1692 nt9.1□□□□□ -0.95
RPN3P40016 YMR007WYMR007W 381 nt9.1□□□□□ -0.95
RPN3P40016 RPC31YNL151C 756 nt9.1□□□□□ -0.95
RPN3P40016 ODC1YPL134C 933 nt9.1□□□□□ -0.95
RPN3P40016 YFR020WYFR020W 699 nt9.08□□□□□ -0.96
RPN3P40016 YGR210CYGR210C 1236 nt9.08□□□□□ -0.96
RPN3P40016 HEL2YDR266C 1920 nt9.07□□□□□ -0.96
RPN3P40016 LCP5YER127W 1074 nt9.06□□□□□ -0.96
RPN3P40016 SBP1YHL034C 885 nt9.06□□□□□ -0.96
RPN3P40016 GAS1YMR307W 1680 nt9.05□□□□□ -0.96
RPN3P40016 RCR1YBR005W 642 nt9.05□□□□□ -0.96
RPN3P40016 YGL114WYGL114W 2178 nt9.05□□□□□ -0.96
RPN3P40016 DPL1YDR294C 1770 nt9.04□□□□□ -0.96
RPN3P40016 TGA1tA(UGC)A 73 nt9.04□□□□□ -0.96
RPN3P40016 tA(UGC)EtA(UGC)E 73 nt9.04□□□□□ -0.96
RPN3P40016 tA(UGC)GtA(UGC)G 73 nt9.04□□□□□ -0.96
RPN3P40016 tA(UGC)LtA(UGC)L 73 nt9.04□□□□□ -0.96
RPN3P40016 tA(UGC)OtA(UGC)O 73 nt9.04□□□□□ -0.96
RPN3P40016 URH1YDR400W 1023 nt9.04□□□□□ -0.96
RPN3P40016 PTC6YCR079W 1329 nt9.04□□□□□ -0.96
RPN3P40016 RIM8YGL045W 1629 nt9.02□□□□□ -0.97
RPN3P40016 RSM7YJR113C 744 nt9.01□□□□□ -0.97
RPN3P40016 MDM35YKL053C-A 261 nt9.01□□□□□ -0.97
RPN3P40016 YPL108WYPL108W 507 nt9.01□□□□□ -0.97
RPN3P40016 MET2YNL277W 1461 nt9.01□□□□□ -0.97
RPN3P40016 YRF1-2YER190W 5046 nt9□□□□□ -0.97
RPN3P40016 POP2YNR052C 1302 nt9□□□□□ -0.97
RPN3P40016 AI5_BETAQ0075 1065 nt8.99□□□□□ -0.97
RPN3P40016 TOM20YGR082W 552 nt8.98□□□□□ -0.97
RPN3P40016 FCY1YPR062W 477 nt8.98□□□□□ -0.97
RPN3P40016 YER152W-AYER152W-A 567 nt8.97□□□□□ -0.97
RPN3P40016 GGA2YHR108W 1758 nt8.96□□□□□ -0.97
RPN3P40016 YMR316C-BYMR316C-B 309 nt8.96□□□□□ -0.98
RPN3P40016 THI3YDL080C 1830 nt8.95□□□□□ -0.98
RPN3P40016 YJL160CYJL160C 864 nt8.93□□□□□ -0.98
RPN3P40016 YMR166CYMR166C 1107 nt8.93□□□□□ -0.98
RPN3P40016 YMR209CYMR209C 1374 nt8.93□□□□□ -0.98
RPN3P40016 GID7YCL039W 2238 nt8.93□□□□□ -0.98
RPN3P40016 DMA2YNL116W 1569 nt8.92□□□□□ -0.98
RPN3P40016 GPM1YKL152C 744 nt8.92□□□□□ -0.98
RPN3P40016 SFP1YLR403W 2052 nt8.92□□□□□ -0.98
RPN3P40016 LEU4YNL104C 1860 nt8.91□□□□□ -0.98
RPN3P40016 BUR6YER159C 429 nt8.9□□□□□ -0.98
RPN3P40016 YLR460CYLR460C 1131 nt8.9□□□□□ -0.98
RPN3P40016 LSP1YPL004C 1026 nt8.9□□□□□ -0.98
RPN3P40016 YDR467CYDR467C 327 nt8.89□□□□□ -0.99
RPN3P40016 YPL041CYPL041C 624 nt8.89□□□□□ -0.99
RPN3P40016 EMC3YKL207W 762 nt8.88□□□□□ -0.99
RPN3P40016 COG1YGL223C 1254 nt8.87□□□□□ -0.99
RPN3P40016 NPP1YCR026C 2229 nt8.86□□□□□ -0.99
RPN3P40016 tE(CUC)DtE(CUC)D 72 nt8.86□□□□□ -0.99
RPN3P40016 tE(CUC)ItE(CUC)I 72 nt8.86□□□□□ -0.99
RPN3P40016 CAK1YFL029C 1107 nt8.86□□□□□ -0.99
RPN3P40016 RRT14YIL127C 621 nt8.86□□□□□ -0.99
RPN3P40016 MET22YOL064C 1074 nt8.86□□□□□ -0.99
RPN3P40016 YMR210WYMR210W 1350 nt8.86□□□□□ -0.99
RPN3P40016 INH1YDL181W 258 nt8.85□□□□□ -0.99
RPN3P40016 CHS7YHR142W 951 nt8.85□□□□□ -0.99
RPN3P40016 BUD20YLR074C 501 nt8.85□□□□□ -0.99
RPN3P40016 OCH1YGL038C 1443 nt8.85□□□□□ -0.99
RPN3P40016 HXT10YFL011W 1641 nt8.83□□□□□ -1
RPN3P40016 YDR510C-AYDR510C-A 117 nt8.83□□□□□ -1
RPN3P40016 YIR035CYIR035C 765 nt8.83□□□□□ -1
RPN3P40016 AAC3YBR085W 924 nt8.83□□□□□ -1
RPN3P40016 PET18YCR020C 648 nt8.82□□□□□ -1
RPN3P40016 GRH1YDR517W 1119 nt8.82□□□□□ -1
RPN3P40016 YBL095WYBL095W 813 nt8.82□□□□□ -1
RPN3P40016 TMS1YDR105C 1422 nt8.81□□□□□ -1
RPN3P40016 RNA170RNA170 169 nt8.81□□□□□ -1
RPN3P40016 YNL067W-AYNL067W-A 147 nt8.81□□□□□ -1
RPN3P40016 OLA1YBR025C 1185 nt8.81□□□□□ -1
RPN3P40016 YOR343CYOR343C 327 nt8.81□□□□□ -1
RPN3P40016 FTH1YBR207W 1398 nt8.81□□□□□ -1
RPN3P40016 PDC6YGR087C 1692 nt8.81□□□□□ -1
RPN3P40016 YHR218WYHR218W 1812 nt8.8□□□□□ -1
RPN3P40016 HRA1HRA1 564 nt8.8□□□□□ -1
RPN3P40016 YER156CYER156C 1017 nt8.79□□□□□ -1
RPN3P40016 YMC2YBR104W 990 nt8.79□□□□□ -1
RPN3P40016 AGP3YFL055W 1677 nt8.78□□□□□ -1
RPN3P40016 YRF1-3YGR296W 5580 nt8.78□□□□□ -1
RPN3P40016 YRF1-6YNL339C 5580 nt8.78□□□□□ -1
RPN3P40016 YRF1-7YPL283C 5580 nt8.78□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms