Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RETP07949 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.36■■□□□ 1.81
RETP07949 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
RETP07949 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RETP07949 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RETP07949 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.36■■□□□ 1.81
RETP07949 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETP07949 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RETP07949 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RETP07949 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.34■■□□□ 1.81
RETP07949 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.34■■□□□ 1.81
RETP07949 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RETP07949 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.34■■□□□ 1.81
RETP07949 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RETP07949 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RETP07949 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RETP07949 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETP07949 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RETP07949 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETP07949 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.31■■□□□ 1.8
RETP07949 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RETP07949 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETP07949 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RETP07949 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETP07949 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETP07949 AC012354.3-201ENST00000623734 483 ntBASIC26.29■■□□□ 1.8
RETP07949 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
RETP07949 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.28■■□□□ 1.8
RETP07949 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RETP07949 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RETP07949 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
RETP07949 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RETP07949 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RETP07949 NTF6A-201ENST00000591175 560 ntBASIC26.27■■□□□ 1.8
RETP07949 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RETP07949 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.26■■□□□ 1.79
RETP07949 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RETP07949 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.26■■□□□ 1.79
RETP07949 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
RETP07949 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.25■■□□□ 1.79
RETP07949 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RETP07949 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RETP07949 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RETP07949 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RETP07949 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.24■■□□□ 1.79
RETP07949 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.23■■□□□ 1.79
RETP07949 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETP07949 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETP07949 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETP07949 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RETP07949 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETP07949 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.2■■□□□ 1.78
RETP07949 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
RETP07949 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RETP07949 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.19■■□□□ 1.78
RETP07949 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETP07949 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETP07949 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RETP07949 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RETP07949 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
RETP07949 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RETP07949 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETP07949 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RETP07949 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.17■■□□□ 1.78
RETP07949 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETP07949 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.14■■□□□ 1.78
RETP07949 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RETP07949 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.14■■□□□ 1.78
RETP07949 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RETP07949 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETP07949 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
RETP07949 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETP07949 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RETP07949 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RETP07949 AC022413.1-201ENST00000624602 984 ntBASIC26.12■■□□□ 1.77
RETP07949 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.11■■□□□ 1.77
RETP07949 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RETP07949 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.11■■□□□ 1.77
RETP07949 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RETP07949 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
RETP07949 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RETP07949 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RETP07949 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RETP07949 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RETP07949 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.08■■□□□ 1.77
RETP07949 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RETP07949 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.08■■□□□ 1.77
RETP07949 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.08■■□□□ 1.77
RETP07949 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.07■■□□□ 1.76
RETP07949 AC018358.1-201ENST00000631079 1402 ntBASIC26.07■■□□□ 1.76
RETP07949 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RETP07949 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RETP07949 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.07■■□□□ 1.76
RETP07949 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RETP07949 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RETP07949 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RETP07949 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RETP07949 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.05■■□□□ 1.76
RETP07949 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.04■■□□□ 1.76
RETP07949 AL033527.3-201ENST00000566366 1196 ntBASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms