Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MT-CO1P00395 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MT-CO1P00395 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.57■■□□□ 1.84
MT-CO1P00395 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MT-CO1P00395 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-CO1P00395 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-CO1P00395 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-CO1P00395 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
MT-CO1P00395 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO1P00395 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO1P00395 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO1P00395 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO1P00395 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-CO1P00395 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-CO1P00395 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.54■■□□□ 1.84
MT-CO1P00395 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-CO1P00395 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MT-CO1P00395 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.53■■□□□ 1.84
MT-CO1P00395 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MT-CO1P00395 AC127502.1-201ENST00000399971 1502 ntBASIC26.53■■□□□ 1.84
MT-CO1P00395 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MT-CO1P00395 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.51■■□□□ 1.83
MT-CO1P00395 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
MT-CO1P00395 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
MT-CO1P00395 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MT-CO1P00395 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.48■■□□□ 1.83
MT-CO1P00395 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.48■■□□□ 1.83
MT-CO1P00395 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
MT-CO1P00395 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
MT-CO1P00395 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.47■■□□□ 1.83
MT-CO1P00395 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
MT-CO1P00395 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-CO1P00395 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.46■■□□□ 1.83
MT-CO1P00395 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
MT-CO1P00395 LINC01971-201ENST00000617888 1048 ntBASIC26.45■■□□□ 1.82
MT-CO1P00395 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.44■■□□□ 1.82
MT-CO1P00395 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
MT-CO1P00395 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.43■■□□□ 1.82
MT-CO1P00395 LINC00273-201ENST00000539813 1452 ntBASIC26.42■■□□□ 1.82
MT-CO1P00395 DUX4L11-201ENST00000611504 1267 ntBASIC26.42■■□□□ 1.82
MT-CO1P00395 DUX4L12-201ENST00000614593 1267 ntBASIC26.42■■□□□ 1.82
MT-CO1P00395 DUX4L14-201ENST00000621227 1267 ntBASIC26.42■■□□□ 1.82
MT-CO1P00395 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
MT-CO1P00395 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
MT-CO1P00395 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
MT-CO1P00395 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.4■■□□□ 1.82
MT-CO1P00395 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.39■■□□□ 1.82
MT-CO1P00395 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MT-CO1P00395 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.39■■□□□ 1.82
MT-CO1P00395 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
MT-CO1P00395 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
MT-CO1P00395 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
MT-CO1P00395 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
MT-CO1P00395 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
MT-CO1P00395 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MT-CO1P00395 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MT-CO1P00395 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
MT-CO1P00395 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.37■■□□□ 1.81
MT-CO1P00395 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
MT-CO1P00395 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MT-CO1P00395 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
MT-CO1P00395 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MT-CO1P00395 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MT-CO1P00395 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MT-CO1P00395 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
MT-CO1P00395 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MT-CO1P00395 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
MT-CO1P00395 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MT-CO1P00395 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.34■■□□□ 1.81
MT-CO1P00395 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.34■■□□□ 1.81
MT-CO1P00395 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
MT-CO1P00395 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MT-CO1P00395 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.34■■□□□ 1.81
MT-CO1P00395 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.33■■□□□ 1.81
MT-CO1P00395 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.33■■□□□ 1.81
MT-CO1P00395 MIR3648-2-201ENST00000581792 180 ntBASIC26.33■■□□□ 1.81
MT-CO1P00395 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.33■■□□□ 1.81
MT-CO1P00395 MIR3648-1-201ENST00000615959 180 ntBASIC26.33■■□□□ 1.81
MT-CO1P00395 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.32■■□□□ 1.8
MT-CO1P00395 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MT-CO1P00395 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MT-CO1P00395 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MT-CO1P00395 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MT-CO1P00395 HLA-V-202ENST00000446817 847 ntBASIC26.31■■□□□ 1.8
MT-CO1P00395 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.31■■□□□ 1.8
MT-CO1P00395 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.31■■□□□ 1.8
MT-CO1P00395 CR559946.2-201ENST00000623684 991 ntBASIC26.31■■□□□ 1.8
MT-CO1P00395 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
MT-CO1P00395 AC135983.2-203ENST00000454486 1613 ntBASIC26.31■■□□□ 1.8
MT-CO1P00395 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.3■■□□□ 1.8
MT-CO1P00395 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.3■■□□□ 1.8
MT-CO1P00395 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
MT-CO1P00395 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
MT-CO1P00395 WHAMMP2-203ENST00000563942 1603 ntBASIC26.3■■□□□ 1.8
MT-CO1P00395 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MT-CO1P00395 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.3■■□□□ 1.8
MT-CO1P00395 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
MT-CO1P00395 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
MT-CO1P00395 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.29■■□□□ 1.8
MT-CO1P00395 AC016575.1-201ENST00000607026 382 ntBASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms