Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
TRIM13O60858 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM13O60858 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.46■■□□□ 1.67
TRIM13O60858 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.46■■□□□ 1.67
TRIM13O60858 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.45■■□□□ 1.67
TRIM13O60858 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM13O60858 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.45■■□□□ 1.66
TRIM13O60858 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.44■■□□□ 1.66
TRIM13O60858 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.44■■□□□ 1.66
TRIM13O60858 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TRIM13O60858 AP004833.2-201ENST00000532228 1454 ntBASIC25.44■■□□□ 1.66
TRIM13O60858 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TRIM13O60858 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM13O60858 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM13O60858 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM13O60858 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM13O60858 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.39■■□□□ 1.66
TRIM13O60858 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.39■■□□□ 1.66
TRIM13O60858 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM13O60858 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
TRIM13O60858 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM13O60858 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM13O60858 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM13O60858 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 RARRES2P7-201ENST00000567349 469 ntBASIC25.37■■□□□ 1.65
TRIM13O60858 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 SETD8P1-201ENST00000623146 1180 ntBASIC25.36■■□□□ 1.65
TRIM13O60858 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 BX255925.1-201ENST00000566954 1854 ntBASIC25.36■■□□□ 1.65
TRIM13O60858 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
TRIM13O60858 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM13O60858 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
TRIM13O60858 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM13O60858 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
TRIM13O60858 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM13O60858 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM13O60858 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 AC127502.1-201ENST00000399971 1502 ntBASIC25.29■■□□□ 1.64
TRIM13O60858 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM13O60858 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM13O60858 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM13O60858 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM13O60858 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
TRIM13O60858 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.26■■□□□ 1.63
TRIM13O60858 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.25■■□□□ 1.63
TRIM13O60858 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM13O60858 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
TRIM13O60858 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms