Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
TRIM13O60858 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM13O60858 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.46■■□□□ 1.67
TRIM13O60858 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.46■■□□□ 1.67
TRIM13O60858 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.45■■□□□ 1.67
TRIM13O60858 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM13O60858 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.45■■□□□ 1.66
TRIM13O60858 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM13O60858 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.44■■□□□ 1.66
TRIM13O60858 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.44■■□□□ 1.66
TRIM13O60858 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TRIM13O60858 AP004833.2-201ENST00000532228 1454 ntBASIC25.44■■□□□ 1.66
TRIM13O60858 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM13O60858 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM13O60858 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TRIM13O60858 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM13O60858 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM13O60858 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM13O60858 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM13O60858 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM13O60858 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM13O60858 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.39■■□□□ 1.66
TRIM13O60858 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.39■■□□□ 1.66
TRIM13O60858 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM13O60858 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
TRIM13O60858 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM13O60858 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM13O60858 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM13O60858 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 RARRES2P7-201ENST00000567349 469 ntBASIC25.37■■□□□ 1.65
TRIM13O60858 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM13O60858 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 SETD8P1-201ENST00000623146 1180 ntBASIC25.36■■□□□ 1.65
TRIM13O60858 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM13O60858 BX255925.1-201ENST00000566954 1854 ntBASIC25.36■■□□□ 1.65
TRIM13O60858 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM13O60858 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
TRIM13O60858 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM13O60858 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM13O60858 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM13O60858 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
TRIM13O60858 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM13O60858 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM13O60858 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
TRIM13O60858 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM13O60858 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM13O60858 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM13O60858 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 AC127502.1-201ENST00000399971 1502 ntBASIC25.29■■□□□ 1.64
TRIM13O60858 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM13O60858 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM13O60858 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM13O60858 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM13O60858 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM13O60858 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
TRIM13O60858 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM13O60858 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.26■■□□□ 1.63
TRIM13O60858 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.25■■□□□ 1.63
TRIM13O60858 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM13O60858 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM13O60858 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
TRIM13O60858 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms