Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
NPHS1O60500 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NPHS1O60500 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
NPHS1O60500 AL121749.1-202ENST00000609313 2153 ntBASIC25.31■■□□□ 1.64
NPHS1O60500 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NPHS1O60500 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.31■■□□□ 1.64
NPHS1O60500 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NPHS1O60500 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.3■■□□□ 1.64
NPHS1O60500 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NPHS1O60500 RARRES2P7-201ENST00000567349 469 ntBASIC25.3■■□□□ 1.64
NPHS1O60500 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NPHS1O60500 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NPHS1O60500 SETD8P1-201ENST00000623146 1180 ntBASIC25.29■■□□□ 1.64
NPHS1O60500 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
NPHS1O60500 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.29■■□□□ 1.64
NPHS1O60500 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
NPHS1O60500 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NPHS1O60500 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NPHS1O60500 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.28■■□□□ 1.64
NPHS1O60500 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NPHS1O60500 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NPHS1O60500 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
NPHS1O60500 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NPHS1O60500 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.27■■□□□ 1.64
NPHS1O60500 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NPHS1O60500 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NPHS1O60500 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NPHS1O60500 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NPHS1O60500 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NPHS1O60500 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NPHS1O60500 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.26■■□□□ 1.63
NPHS1O60500 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NPHS1O60500 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
NPHS1O60500 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NPHS1O60500 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
NPHS1O60500 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
NPHS1O60500 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.24■■□□□ 1.63
NPHS1O60500 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
NPHS1O60500 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NPHS1O60500 BX255925.1-201ENST00000566954 1854 ntBASIC25.23■■□□□ 1.63
NPHS1O60500 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.23■■□□□ 1.63
NPHS1O60500 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NPHS1O60500 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NPHS1O60500 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
NPHS1O60500 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NPHS1O60500 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NPHS1O60500 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NPHS1O60500 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NPHS1O60500 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
NPHS1O60500 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NPHS1O60500 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NPHS1O60500 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NPHS1O60500 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
NPHS1O60500 AC127502.1-201ENST00000399971 1502 ntBASIC25.19■■□□□ 1.62
NPHS1O60500 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NPHS1O60500 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NPHS1O60500 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NPHS1O60500 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
NPHS1O60500 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NPHS1O60500 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
NPHS1O60500 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.17■■□□□ 1.62
NPHS1O60500 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
NPHS1O60500 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.17■■□□□ 1.62
NPHS1O60500 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
NPHS1O60500 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NPHS1O60500 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NPHS1O60500 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NPHS1O60500 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.16■■□□□ 1.62
NPHS1O60500 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NPHS1O60500 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NPHS1O60500 AL391121.1-201ENST00000607967 1349 ntBASIC25.15■■□□□ 1.62
NPHS1O60500 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
NPHS1O60500 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
NPHS1O60500 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
NPHS1O60500 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
NPHS1O60500 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NPHS1O60500 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NPHS1O60500 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.14■■□□□ 1.62
NPHS1O60500 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.14■■□□□ 1.61
NPHS1O60500 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPHS1O60500 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPHS1O60500 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPHS1O60500 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPHS1O60500 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
NPHS1O60500 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.13■■□□□ 1.61
NPHS1O60500 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPHS1O60500 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.13■■□□□ 1.61
NPHS1O60500 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
NPHS1O60500 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPHS1O60500 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
NPHS1O60500 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NPHS1O60500 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NPHS1O60500 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NPHS1O60500 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPHS1O60500 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPHS1O60500 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NPHS1O60500 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.08■■□□□ 1.61
NPHS1O60500 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NPHS1O60500 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NPHS1O60500 CAHM-201ENST00000604200 896 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms