Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.75■■■□□ 2.03
TBC1D4O60343 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TBC1D4O60343 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TBC1D4O60343 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TBC1D4O60343 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.73■■■□□ 2.03
TBC1D4O60343 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.73■■■□□ 2.03
TBC1D4O60343 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.73■■■□□ 2.03
TBC1D4O60343 AL135925.1-201ENST00000605920 1701 ntBASIC27.72■■■□□ 2.03
TBC1D4O60343 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
TBC1D4O60343 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TBC1D4O60343 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
TBC1D4O60343 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.71■■■□□ 2.03
TBC1D4O60343 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TBC1D4O60343 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TBC1D4O60343 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TBC1D4O60343 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.68■■■□□ 2.02
TBC1D4O60343 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.68■■■□□ 2.02
TBC1D4O60343 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.68■■■□□ 2.02
TBC1D4O60343 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
TBC1D4O60343 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
TBC1D4O60343 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.66■■■□□ 2.02
TBC1D4O60343 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
TBC1D4O60343 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TBC1D4O60343 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TBC1D4O60343 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
TBC1D4O60343 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TBC1D4O60343 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
TBC1D4O60343 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.01
TBC1D4O60343 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
TBC1D4O60343 AC127502.1-201ENST00000399971 1502 ntBASIC27.63■■■□□ 2.01
TBC1D4O60343 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.63■■■□□ 2.01
TBC1D4O60343 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.62■■■□□ 2.01
TBC1D4O60343 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.62■■■□□ 2.01
TBC1D4O60343 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TBC1D4O60343 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TBC1D4O60343 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.61■■■□□ 2.01
TBC1D4O60343 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TBC1D4O60343 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.57■■■□□ 2
TBC1D4O60343 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TBC1D4O60343 AC135983.2-203ENST00000454486 1613 ntBASIC27.54■■■□□ 2
TBC1D4O60343 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TBC1D4O60343 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.54■■■□□ 2
TBC1D4O60343 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.53■■■□□ 2
TBC1D4O60343 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
TBC1D4O60343 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TBC1D4O60343 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TBC1D4O60343 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.52■■■□□ 2
TBC1D4O60343 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.52■■■□□ 2
TBC1D4O60343 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.52■■■□□ 2
TBC1D4O60343 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
TBC1D4O60343 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TBC1D4O60343 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TBC1D4O60343 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TBC1D4O60343 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TBC1D4O60343 WHAMMP2-203ENST00000563942 1603 ntBASIC27.49■■□□□ 1.99
TBC1D4O60343 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TBC1D4O60343 HSD17B1P1-201ENST00000590052 955 ntBASIC27.49■■□□□ 1.99
TBC1D4O60343 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TBC1D4O60343 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TBC1D4O60343 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.48■■□□□ 1.99
TBC1D4O60343 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.47■■□□□ 1.99
TBC1D4O60343 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TBC1D4O60343 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
TBC1D4O60343 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
TBC1D4O60343 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TBC1D4O60343 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TBC1D4O60343 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
TBC1D4O60343 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.45■■□□□ 1.98
TBC1D4O60343 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.45■■□□□ 1.98
TBC1D4O60343 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TBC1D4O60343 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.44■■□□□ 1.98
TBC1D4O60343 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TBC1D4O60343 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
TBC1D4O60343 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.43■■□□□ 1.98
TBC1D4O60343 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.43■■□□□ 1.98
TBC1D4O60343 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TBC1D4O60343 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
TBC1D4O60343 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TBC1D4O60343 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.42■■□□□ 1.98
TBC1D4O60343 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.42■■□□□ 1.98
TBC1D4O60343 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
TBC1D4O60343 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.42■■□□□ 1.98
TBC1D4O60343 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.41■■□□□ 1.98
TBC1D4O60343 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.41■■□□□ 1.98
TBC1D4O60343 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TBC1D4O60343 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TBC1D4O60343 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
TBC1D4O60343 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D4O60343 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.4■■□□□ 1.98
TBC1D4O60343 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D4O60343 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms