Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SSX4O60224 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SSX4O60224 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SSX4O60224 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SSX4O60224 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SSX4O60224 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSX4O60224 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.25■■□□□ 1.31
SSX4O60224 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.25■■□□□ 1.31
SSX4O60224 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSX4O60224 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSX4O60224 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSX4O60224 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSX4O60224 MIR762-201ENST00000390236 83 ntBASIC23.24■■□□□ 1.31
SSX4O60224 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.23■■□□□ 1.31
SSX4O60224 DUX4L28-201ENST00000623687 678 ntBASIC23.23■■□□□ 1.31
SSX4O60224 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.22■■□□□ 1.31
SSX4O60224 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SSX4O60224 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSX4O60224 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSX4O60224 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SSX4O60224 AC087741.3-201ENST00000624270 1347 ntBASIC23.2■■□□□ 1.3
SSX4O60224 AC005559.1-201ENST00000589661 871 ntBASIC23.2■■□□□ 1.3
SSX4O60224 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSX4O60224 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SSX4O60224 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SSX4O60224 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSX4O60224 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SSX4O60224 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSX4O60224 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSX4O60224 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SSX4O60224 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSX4O60224 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SSX4O60224 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSX4O60224 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSX4O60224 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.15■■□□□ 1.3
SSX4O60224 ABHD17AP4-201ENST00000411545 909 ntBASIC23.15■■□□□ 1.3
SSX4O60224 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.15■■□□□ 1.3
SSX4O60224 AC044849.2-201ENST00000606596 710 ntBASIC23.15■■□□□ 1.3
SSX4O60224 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SSX4O60224 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.14■■□□□ 1.3
SSX4O60224 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.14■■□□□ 1.3
SSX4O60224 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SSX4O60224 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSX4O60224 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSX4O60224 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSX4O60224 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSX4O60224 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSX4O60224 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSX4O60224 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSX4O60224 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SSX4O60224 MIR7108-201ENST00000614319 87 ntBASIC23.12■■□□□ 1.29
SSX4O60224 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SSX4O60224 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSX4O60224 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SSX4O60224 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSX4O60224 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.1■■□□□ 1.29
SSX4O60224 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SSX4O60224 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SSX4O60224 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.09■■□□□ 1.29
SSX4O60224 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.09■■□□□ 1.29
SSX4O60224 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.09■■□□□ 1.29
SSX4O60224 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SSX4O60224 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SSX4O60224 WASH5P-204ENST00000632292 975 ntBASIC23.08■■□□□ 1.29
SSX4O60224 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SSX4O60224 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SSX4O60224 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SSX4O60224 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SSX4O60224 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SSX4O60224 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SSX4O60224 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SSX4O60224 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.05■■□□□ 1.28
SSX4O60224 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.05■■□□□ 1.28
SSX4O60224 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SSX4O60224 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SSX4O60224 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SSX4O60224 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.04■■□□□ 1.28
SSX4O60224 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SSX4O60224 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SSX4O60224 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SSX4O60224 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
SSX4O60224 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SSX4O60224 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SSX4O60224 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SSX4O60224 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SSX4O60224 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SSX4O60224 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23■■□□□ 1.27
SSX4O60224 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SSX4O60224 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SSX4O60224 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.99■■□□□ 1.27
SSX4O60224 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
SSX4O60224 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.99■■□□□ 1.27
SSX4O60224 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SSX4O60224 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.99■■□□□ 1.27
SSX4O60224 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SSX4O60224 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SSX4O60224 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.98■■□□□ 1.27
SSX4O60224 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SSX4O60224 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SSX4O60224 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms