Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CDX4O14627 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CDX4O14627 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDX4O14627 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CDX4O14627 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CDX4O14627 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDX4O14627 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDX4O14627 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDX4O14627 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.68■■□□□ 1.7
CDX4O14627 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDX4O14627 LINC00273-201ENST00000539813 1452 ntBASIC25.67■■□□□ 1.7
CDX4O14627 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDX4O14627 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CDX4O14627 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDX4O14627 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDX4O14627 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDX4O14627 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDX4O14627 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDX4O14627 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDX4O14627 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDX4O14627 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CDX4O14627 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CDX4O14627 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.62■■□□□ 1.69
CDX4O14627 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDX4O14627 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
CDX4O14627 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.61■■□□□ 1.69
CDX4O14627 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDX4O14627 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDX4O14627 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDX4O14627 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.6■■□□□ 1.69
CDX4O14627 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDX4O14627 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
CDX4O14627 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDX4O14627 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CDX4O14627 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDX4O14627 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDX4O14627 AL033527.3-201ENST00000566366 1196 ntBASIC25.58■■□□□ 1.69
CDX4O14627 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDX4O14627 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDX4O14627 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDX4O14627 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDX4O14627 AC008813.1-201ENST00000536597 885 ntBASIC25.57■■□□□ 1.68
CDX4O14627 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.57■■□□□ 1.68
CDX4O14627 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
CDX4O14627 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDX4O14627 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDX4O14627 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDX4O14627 AC018358.1-201ENST00000631079 1402 ntBASIC25.56■■□□□ 1.68
CDX4O14627 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CDX4O14627 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDX4O14627 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDX4O14627 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.54■■□□□ 1.68
CDX4O14627 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDX4O14627 AC120057.4-201ENST00000624722 1615 ntBASIC25.53■■□□□ 1.68
CDX4O14627 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CDX4O14627 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDX4O14627 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.53■■□□□ 1.68
CDX4O14627 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.52■■□□□ 1.68
CDX4O14627 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CDX4O14627 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CDX4O14627 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDX4O14627 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDX4O14627 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CDX4O14627 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.5■■□□□ 1.67
CDX4O14627 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.5■■□□□ 1.67
CDX4O14627 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDX4O14627 U85056.1-201ENST00000616429 682 ntBASIC25.5■■□□□ 1.67
CDX4O14627 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDX4O14627 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDX4O14627 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.48■■□□□ 1.67
CDX4O14627 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.48■■□□□ 1.67
CDX4O14627 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDX4O14627 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDX4O14627 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.46■■□□□ 1.67
CDX4O14627 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDX4O14627 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDX4O14627 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDX4O14627 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDX4O14627 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDX4O14627 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.44■■□□□ 1.66
CDX4O14627 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.44■■□□□ 1.66
CDX4O14627 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.44■■□□□ 1.66
CDX4O14627 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.43■■□□□ 1.66
CDX4O14627 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDX4O14627 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.43■■□□□ 1.66
CDX4O14627 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDX4O14627 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDX4O14627 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDX4O14627 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDX4O14627 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.41■■□□□ 1.66
CDX4O14627 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.4■■□□□ 1.66
CDX4O14627 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDX4O14627 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.4■■□□□ 1.66
CDX4O14627 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.39■■□□□ 1.66
CDX4O14627 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDX4O14627 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDX4O14627 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDX4O14627 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CDX4O14627 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.38■■□□□ 1.65
CDX4O14627 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms