Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV25A0A0B4J276 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV25A0A0B4J276 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV25A0A0B4J276 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV25A0A0B4J276 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV25A0A0B4J276 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAV25A0A0B4J276 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV25A0A0B4J276 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV25A0A0B4J276 LINC00273-201ENST00000539813 1452 ntBASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV25A0A0B4J276 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 ZNRF2P2-203ENST00000454624 420 ntBASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV25A0A0B4J276 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV25A0A0B4J276 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV25A0A0B4J276 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV25A0A0B4J276 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV25A0A0B4J276 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV25A0A0B4J276 LINC01971-201ENST00000617888 1048 ntBASIC19.46■□□□□ 0.71
TRAV25A0A0B4J276 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV25A0A0B4J276 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRAV25A0A0B4J276 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV25A0A0B4J276 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV25A0A0B4J276 AP004833.2-201ENST00000532228 1454 ntBASIC19.45■□□□□ 0.7
TRAV25A0A0B4J276 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV25A0A0B4J276 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV25A0A0B4J276 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV25A0A0B4J276 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV25A0A0B4J276 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TRAV25A0A0B4J276 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV25A0A0B4J276 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV25A0A0B4J276 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV25A0A0B4J276 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV25A0A0B4J276 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV25A0A0B4J276 MIR7108-201ENST00000614319 87 ntBASIC19.4■□□□□ 0.7
TRAV25A0A0B4J276 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV25A0A0B4J276 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV25A0A0B4J276 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV25A0A0B4J276 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV25A0A0B4J276 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV25A0A0B4J276 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV25A0A0B4J276 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV25A0A0B4J276 AC135983.2-203ENST00000454486 1613 ntBASIC19.38■□□□□ 0.69
TRAV25A0A0B4J276 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV25A0A0B4J276 ABCB10P1-201ENST00000614297 2181 ntBASIC19.36■□□□□ 0.69
TRAV25A0A0B4J276 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV25A0A0B4J276 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV25A0A0B4J276 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV25A0A0B4J276 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV25A0A0B4J276 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 DUX4L11-201ENST00000611504 1267 ntBASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 DUX4L12-201ENST00000614593 1267 ntBASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 DUX4L14-201ENST00000621227 1267 ntBASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV25A0A0B4J276 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV25A0A0B4J276 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TRAV25A0A0B4J276 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV25A0A0B4J276 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV25A0A0B4J276 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAV25A0A0B4J276 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV25A0A0B4J276 DUX4L13-201ENST00000554103 1267 ntBASIC19.31■□□□□ 0.68
TRAV25A0A0B4J276 DUX4L15-201ENST00000611059 1267 ntBASIC19.31■□□□□ 0.68
TRAV25A0A0B4J276 DUX4L23-201ENST00000615195 1269 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms