Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRAV4A0A0B4J268 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAV4A0A0B4J268 SUZ12P1-203ENST00000578195 985 ntBASIC18.55■□□□□ 0.56
TRAV4A0A0B4J268 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV4A0A0B4J268 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.55■□□□□ 0.56
TRAV4A0A0B4J268 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV4A0A0B4J268 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV4A0A0B4J268 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV4A0A0B4J268 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV4A0A0B4J268 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRAV4A0A0B4J268 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV4A0A0B4J268 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV4A0A0B4J268 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV4A0A0B4J268 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV4A0A0B4J268 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV4A0A0B4J268 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV4A0A0B4J268 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV4A0A0B4J268 AC005559.1-201ENST00000589661 871 ntBASIC18.51■□□□□ 0.55
TRAV4A0A0B4J268 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV4A0A0B4J268 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV4A0A0B4J268 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV4A0A0B4J268 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV4A0A0B4J268 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV4A0A0B4J268 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV4A0A0B4J268 AP004833.2-201ENST00000532228 1454 ntBASIC18.47■□□□□ 0.55
TRAV4A0A0B4J268 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 AC127502.1-201ENST00000399971 1502 ntBASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV4A0A0B4J268 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV4A0A0B4J268 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV4A0A0B4J268 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV4A0A0B4J268 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV4A0A0B4J268 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV4A0A0B4J268 AC142086.6-201ENST00000621154 1765 ntBASIC18.43■□□□□ 0.54
TRAV4A0A0B4J268 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV4A0A0B4J268 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV4A0A0B4J268 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV4A0A0B4J268 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV4A0A0B4J268 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV4A0A0B4J268 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV4A0A0B4J268 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAV4A0A0B4J268 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV4A0A0B4J268 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV4A0A0B4J268 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 AC108673.1-201ENST00000510422 1159 ntBASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 MIR3665-201ENST00000578708 105 ntBASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV4A0A0B4J268 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 AP006261.1-201ENST00000584783 668 ntBASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV4A0A0B4J268 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 DRD5P2-201ENST00000421395 2012 ntBASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 DUX4L28-201ENST00000623687 678 ntBASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV4A0A0B4J268 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV4A0A0B4J268 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV4A0A0B4J268 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV4A0A0B4J268 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV4A0A0B4J268 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRAV4A0A0B4J268 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms