Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-2A0A0B4J237 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV8-2A0A0B4J237 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV8-2A0A0B4J237 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-2A0A0B4J237 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRAV8-2A0A0B4J237 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV8-2A0A0B4J237 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-2A0A0B4J237 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV8-2A0A0B4J237 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV8-2A0A0B4J237 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV8-2A0A0B4J237 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-2A0A0B4J237 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-2A0A0B4J237 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV8-2A0A0B4J237 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV8-2A0A0B4J237 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV8-2A0A0B4J237 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TRAV8-2A0A0B4J237 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV8-2A0A0B4J237 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-2A0A0B4J237 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRAV8-2A0A0B4J237 AC127502.1-201ENST00000399971 1502 ntBASIC19.53■□□□□ 0.72
TRAV8-2A0A0B4J237 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-2A0A0B4J237 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV8-2A0A0B4J237 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV8-2A0A0B4J237 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV8-2A0A0B4J237 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TRAV8-2A0A0B4J237 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV8-2A0A0B4J237 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV8-2A0A0B4J237 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 MIR762-201ENST00000390236 83 ntBASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRAV8-2A0A0B4J237 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRAV8-2A0A0B4J237 AP004833.2-201ENST00000532228 1454 ntBASIC19.5■□□□□ 0.71
TRAV8-2A0A0B4J237 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-2A0A0B4J237 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV8-2A0A0B4J237 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV8-2A0A0B4J237 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-2A0A0B4J237 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-2A0A0B4J237 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-2A0A0B4J237 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-2A0A0B4J237 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-2A0A0B4J237 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV8-2A0A0B4J237 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-2A0A0B4J237 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRAV8-2A0A0B4J237 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 SUZ12P1-203ENST00000578195 985 ntBASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV8-2A0A0B4J237 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV8-2A0A0B4J237 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-2A0A0B4J237 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-2A0A0B4J237 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV8-2A0A0B4J237 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV8-2A0A0B4J237 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV8-2A0A0B4J237 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-2A0A0B4J237 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV8-2A0A0B4J237 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-2A0A0B4J237 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-2A0A0B4J237 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV8-2A0A0B4J237 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-2A0A0B4J237 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV8-2A0A0B4J237 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-2A0A0B4J237 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms