Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV26-1A0A087WT03 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV26-1A0A087WT03 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV26-1A0A087WT03 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV26-1A0A087WT03 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV26-1A0A087WT03 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV26-1A0A087WT03 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV26-1A0A087WT03 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV26-1A0A087WT03 ST7-AS1-201ENST00000456775 1889 ntBASIC18.41■□□□□ 0.54
TRAV26-1A0A087WT03 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 MIR6090-201ENST00000622481 60 ntBASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV26-1A0A087WT03 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV26-1A0A087WT03 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV26-1A0A087WT03 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 ABCB10P1-201ENST00000614297 2181 ntBASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV26-1A0A087WT03 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV26-1A0A087WT03 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV26-1A0A087WT03 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV26-1A0A087WT03 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV26-1A0A087WT03 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV26-1A0A087WT03 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV26-1A0A087WT03 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAV26-1A0A087WT03 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV26-1A0A087WT03 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV26-1A0A087WT03 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV26-1A0A087WT03 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV26-1A0A087WT03 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.34■□□□□ 0.53
TRAV26-1A0A087WT03 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV26-1A0A087WT03 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV26-1A0A087WT03 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV26-1A0A087WT03 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV26-1A0A087WT03 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRAV26-1A0A087WT03 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV26-1A0A087WT03 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV26-1A0A087WT03 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAV26-1A0A087WT03 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV26-1A0A087WT03 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV26-1A0A087WT03 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV26-1A0A087WT03 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV26-1A0A087WT03 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV26-1A0A087WT03 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV26-1A0A087WT03 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV26-1A0A087WT03 DUX4L29-201ENST00000425409 679 ntBASIC18.31■□□□□ 0.52
TRAV26-1A0A087WT03 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV26-1A0A087WT03 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV26-1A0A087WT03 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV26-1A0A087WT03 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV26-1A0A087WT03 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV26-1A0A087WT03 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV26-1A0A087WT03 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV26-1A0A087WT03 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV26-1A0A087WT03 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV26-1A0A087WT03 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV26-1A0A087WT03 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV26-1A0A087WT03 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRAV26-1A0A087WT03 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV26-1A0A087WT03 AC021231.2-201ENST00000594613 730 ntBASIC18.26■□□□□ 0.51
TRAV26-1A0A087WT03 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV26-1A0A087WT03 AC127502.1-201ENST00000399971 1502 ntBASIC18.25■□□□□ 0.51
TRAV26-1A0A087WT03 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms