Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV30A0A087WSZ9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV30A0A087WSZ9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV30A0A087WSZ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV30A0A087WSZ9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV30A0A087WSZ9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV30A0A087WSZ9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV30A0A087WSZ9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TRAV30A0A087WSZ9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV30A0A087WSZ9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV30A0A087WSZ9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV30A0A087WSZ9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV30A0A087WSZ9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV30A0A087WSZ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV30A0A087WSZ9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV30A0A087WSZ9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRAV30A0A087WSZ9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV30A0A087WSZ9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV30A0A087WSZ9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRAV30A0A087WSZ9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
TRAV30A0A087WSZ9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV30A0A087WSZ9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TRAV30A0A087WSZ9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV30A0A087WSZ9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 DRD5P2-201ENST00000421395 2012 ntBASIC20.12■□□□□ 0.81
TRAV30A0A087WSZ9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.11■□□□□ 0.81
TRAV30A0A087WSZ9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRAV30A0A087WSZ9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV30A0A087WSZ9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV30A0A087WSZ9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV30A0A087WSZ9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRAV30A0A087WSZ9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV30A0A087WSZ9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRAV30A0A087WSZ9 MIR762-201ENST00000390236 83 ntBASIC20.08■□□□□ 0.81
TRAV30A0A087WSZ9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV30A0A087WSZ9 AC127502.1-201ENST00000399971 1502 ntBASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV30A0A087WSZ9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRAV30A0A087WSZ9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV30A0A087WSZ9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV30A0A087WSZ9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV30A0A087WSZ9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV30A0A087WSZ9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAV30A0A087WSZ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV30A0A087WSZ9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV30A0A087WSZ9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV30A0A087WSZ9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV30A0A087WSZ9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV30A0A087WSZ9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAV30A0A087WSZ9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV30A0A087WSZ9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV30A0A087WSZ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAV30A0A087WSZ9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV30A0A087WSZ9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV30A0A087WSZ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV30A0A087WSZ9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20■□□□□ 0.79
TRAV30A0A087WSZ9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV30A0A087WSZ9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV30A0A087WSZ9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV30A0A087WSZ9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 AC005559.1-201ENST00000589661 871 ntBASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV30A0A087WSZ9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV30A0A087WSZ9 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.98■□□□□ 0.79
TRAV30A0A087WSZ9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV30A0A087WSZ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV30A0A087WSZ9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAV30A0A087WSZ9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV30A0A087WSZ9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms