Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 SGO1P1-201ENST00000603525 1447 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 RNU6-670P-201ENST00000364312 104 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FHL1-203ENST00000370676 833 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL353151.1-201ENST00000402406 604 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 MTND4P24-201ENST00000424002 397 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 RPS21P1-201ENST00000434479 247 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 NMNAT1P2-201ENST00000435192 860 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FDPSP8-201ENST00000438304 1089 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 RPL7P33-201ENST00000444159 742 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC016772.1-201ENST00000444170 1261 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 HSFY3P-201ENST00000444242 1191 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 RPSAP49-201ENST00000445182 886 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 EXTL2P1-201ENST00000446218 416 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 RN7SL19P-201ENST00000462522 306 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 MRPS36P3-201ENST00000519284 130 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 OR10V3P-201ENST00000525712 725 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 OR7E10P-201ENST00000526420 991 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 OR7E128P-201ENST00000532736 1024 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 PSMC1P8-201ENST00000536820 1296 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AP003174.3-201ENST00000537926 516 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AP000619.1-201ENST00000540293 1000 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC023161.2-201ENST00000551218 780 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FDPSP3-201ENST00000556903 1013 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AP005229.2-201ENST00000609980 697 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC016582.3-206ENST00000636547 207 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AC145138.1-201ENST00000512908 2851 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 AL136146.1-201ENST00000529830 1667 ntBASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSBP3Q9BWW4 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 AL035555.1-201ENST00000404462 1790 ntBASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 ELL2P3-201ENST00000457883 1602 ntBASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 CTAGE3P-201ENST00000454280 2404 ntBASIC6.44□□□□□ -1.38
SSBP3Q9BWW4 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms