RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
NR1I3-226ENST00000508740 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
NR1I3-226ENST00000508740 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
NR1I3-226ENST00000508740 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
NR1I3-226ENST00000508740 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
NR1I3-226ENST00000508740 ABCC9O60706 1549 aa15.53■□□□□ 0.08
NR1I3-226ENST00000508740 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
NR1I3-226ENST00000508740 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
NR1I3-226ENST00000508740 FOXD1Q16676 465 aa15.11■□□□□ 0.01
NR1I3-226ENST00000508740 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
NR1I3-226ENST00000508740 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
NR1I3-226ENST00000508740 ADRA2BP18089 450 aa14.8□□□□□ -0.04
NR1I3-226ENST00000508740 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
NR1I3-226ENST00000508740 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
NR1I3-226ENST00000508740 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
NR1I3-226ENST00000508740 NACADO15069 1562 aa14.66□□□□□ -0.06
NR1I3-226ENST00000508740 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
NR1I3-226ENST00000508740 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
NR1I3-226ENST00000508740 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
NR1I3-226ENST00000508740 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
NR1I3-226ENST00000508740 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
NR1I3-226ENST00000508740 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-226ENST00000508740 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
NR1I3-226ENST00000508740 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
NR1I3-226ENST00000508740 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
NR1I3-226ENST00000508740 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
NR1I3-226ENST00000508740 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NR1I3-226ENST00000508740 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NR1I3-226ENST00000508740 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
NR1I3-226ENST00000508740 KCNA4P22459 653 aa13.81□□□□□ -0.2
NR1I3-226ENST00000508740 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
NR1I3-226ENST00000508740 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
NR1I3-226ENST00000508740 MSH5O43196 834 aa13.71□□□□□ -0.21
NR1I3-226ENST00000508740 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
NR1I3-226ENST00000508740 CUX2O14529 1486 aa13.66□□□□□ -0.22
NR1I3-226ENST00000508740 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
NR1I3-226ENST00000508740 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
NR1I3-226ENST00000508740 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
NR1I3-226ENST00000508740 WIZO95785 1651 aa13.52□□□□□ -0.25
NR1I3-226ENST00000508740 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
NR1I3-226ENST00000508740 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
NR1I3-226ENST00000508740 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
NR1I3-226ENST00000508740 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
NR1I3-226ENST00000508740 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
NR1I3-226ENST00000508740 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
NR1I3-226ENST00000508740 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
NR1I3-226ENST00000508740 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-226ENST00000508740 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
NR1I3-226ENST00000508740 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
NR1I3-226ENST00000508740 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
NR1I3-226ENST00000508740 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
NR1I3-226ENST00000508740 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
NR1I3-226ENST00000508740 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
NR1I3-226ENST00000508740 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
NR1I3-226ENST00000508740 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
NR1I3-226ENST00000508740 NESP48681 1621 aa13.23□□□□□ -0.29
NR1I3-226ENST00000508740 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
NR1I3-226ENST00000508740 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
NR1I3-226ENST00000508740 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
NR1I3-226ENST00000508740 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
NR1I3-226ENST00000508740 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
NR1I3-226ENST00000508740 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
NR1I3-226ENST00000508740 WDR62O43379 1518 aa13.04□□□□□ -0.32
NR1I3-226ENST00000508740 LOC105371045A0A1W2PR82 267 aa13.03□□□□□ -0.32
NR1I3-226ENST00000508740 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
NR1I3-226ENST00000508740 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
NR1I3-226ENST00000508740 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
NR1I3-226ENST00000508740 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
NR1I3-226ENST00000508740 CFTRP13569 1480 aa12.96□□□□□ -0.34
NR1I3-226ENST00000508740 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
NR1I3-226ENST00000508740 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-226ENST00000508740 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
NR1I3-226ENST00000508740 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
NR1I3-226ENST00000508740 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
NR1I3-226ENST00000508740 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
NR1I3-226ENST00000508740 SOGA1O94964 1423 aa12.86□□□□□ -0.35
NR1I3-226ENST00000508740 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-226ENST00000508740 EEA1Q15075 1411 aa12.84□□□□□ -0.35
NR1I3-226ENST00000508740 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
NR1I3-226ENST00000508740 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
NR1I3-226ENST00000508740 CUX1P39880 1505 aa12.78□□□□□ -0.36
NR1I3-226ENST00000508740 ZBTB22O15209 634 aa12.76□□□□□ -0.37
NR1I3-226ENST00000508740 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
NR1I3-226ENST00000508740 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
NR1I3-226ENST00000508740 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
NR1I3-226ENST00000508740 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
NR1I3-226ENST00000508740 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
NR1I3-226ENST00000508740 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
NR1I3-226ENST00000508740 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
NR1I3-226ENST00000508740 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
NR1I3-226ENST00000508740 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
NR1I3-226ENST00000508740 UBTFP17480 764 aaKnown RBP12.66□□□□□ -0.38
NR1I3-226ENST00000508740 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
NR1I3-226ENST00000508740 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
NR1I3-226ENST00000508740 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
NR1I3-226ENST00000508740 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-226ENST00000508740 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
NR1I3-226ENST00000508740 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
NR1I3-226ENST00000508740 KIF21BO75037 1637 aa12.6□□□□□ -0.39
NR1I3-226ENST00000508740 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms