RNA–Protein interactions for RNA: ENST00000528848.2

CSNK2A3-201, Transcript of casein kinase 2 alpha 3, humanhuman

APPRIS P1 BASIC

Gene CSNK2A3, Length 1,416 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3-201ENST00000528848 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
CSNK2A3-201ENST00000528848 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
CSNK2A3-201ENST00000528848 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
CSNK2A3-201ENST00000528848 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
CSNK2A3-201ENST00000528848 POTEDQ86YR6 584 aa20.52■□□□□ 0.87
CSNK2A3-201ENST00000528848 FOXD1Q16676 465 aa19.9■□□□□ 0.78
CSNK2A3-201ENST00000528848 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
CSNK2A3-201ENST00000528848 MSH5O43196 834 aa19.25■□□□□ 0.67
CSNK2A3-201ENST00000528848 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
CSNK2A3-201ENST00000528848 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
CSNK2A3-201ENST00000528848 ADRA2BP18089 450 aa17.61■□□□□ 0.41
CSNK2A3-201ENST00000528848 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
CSNK2A3-201ENST00000528848 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
CSNK2A3-201ENST00000528848 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
CSNK2A3-201ENST00000528848 ABCC9O60706 1549 aa16.92■□□□□ 0.3
CSNK2A3-201ENST00000528848 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
CSNK2A3-201ENST00000528848 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
CSNK2A3-201ENST00000528848 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
CSNK2A3-201ENST00000528848 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
CSNK2A3-201ENST00000528848 NACADO15069 1562 aa16.26■□□□□ 0.19
CSNK2A3-201ENST00000528848 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
CSNK2A3-201ENST00000528848 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
CSNK2A3-201ENST00000528848 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
CSNK2A3-201ENST00000528848 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
CSNK2A3-201ENST00000528848 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
CSNK2A3-201ENST00000528848 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
CSNK2A3-201ENST00000528848 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
CSNK2A3-201ENST00000528848 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CSNK2A3-201ENST00000528848 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
CSNK2A3-201ENST00000528848 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
CSNK2A3-201ENST00000528848 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
CSNK2A3-201ENST00000528848 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.11
CSNK2A3-201ENST00000528848 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
CSNK2A3-201ENST00000528848 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
CSNK2A3-201ENST00000528848 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
CSNK2A3-201ENST00000528848 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
CSNK2A3-201ENST00000528848 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
CSNK2A3-201ENST00000528848 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
CSNK2A3-201ENST00000528848 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
CSNK2A3-201ENST00000528848 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
CSNK2A3-201ENST00000528848 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
CSNK2A3-201ENST00000528848 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
CSNK2A3-201ENST00000528848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
CSNK2A3-201ENST00000528848 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
CSNK2A3-201ENST00000528848 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
CSNK2A3-201ENST00000528848 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
CSNK2A3-201ENST00000528848 SMARCA2P51531 1590 aa14.96□□□□□ -0.02
CSNK2A3-201ENST00000528848 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
CSNK2A3-201ENST00000528848 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
CSNK2A3-201ENST00000528848 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
CSNK2A3-201ENST00000528848 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
CSNK2A3-201ENST00000528848 DSG3P32926 999 aa14.78□□□□□ -0.04
CSNK2A3-201ENST00000528848 WIZO95785 1651 aa14.75□□□□□ -0.05
CSNK2A3-201ENST00000528848 CAPN15O75808 1086 aa14.71□□□□□ -0.05
CSNK2A3-201ENST00000528848 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
CSNK2A3-201ENST00000528848 NESP48681 1621 aa14.63□□□□□ -0.07
CSNK2A3-201ENST00000528848 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
CSNK2A3-201ENST00000528848 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
CSNK2A3-201ENST00000528848 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
CSNK2A3-201ENST00000528848 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
CSNK2A3-201ENST00000528848 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
CSNK2A3-201ENST00000528848 CUX2O14529 1486 aa14.55□□□□□ -0.08
CSNK2A3-201ENST00000528848 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.08
CSNK2A3-201ENST00000528848 PRDM2Q13029 1718 aa14.52□□□□□ -0.09
CSNK2A3-201ENST00000528848 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
CSNK2A3-201ENST00000528848 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
CSNK2A3-201ENST00000528848 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
CSNK2A3-201ENST00000528848 SP7Q8TDD2 431 aaPredicted RBP14.41□□□□□ -0.1
CSNK2A3-201ENST00000528848 CFTRP13569 1480 aa14.4□□□□□ -0.1
CSNK2A3-201ENST00000528848 WDR62O43379 1518 aa14.39□□□□□ -0.11
CSNK2A3-201ENST00000528848 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
CSNK2A3-201ENST00000528848 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
CSNK2A3-201ENST00000528848 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
CSNK2A3-201ENST00000528848 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.11
CSNK2A3-201ENST00000528848 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
CSNK2A3-201ENST00000528848 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
CSNK2A3-201ENST00000528848 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
CSNK2A3-201ENST00000528848 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
CSNK2A3-201ENST00000528848 APLP2Q06481 763 aa14.23□□□□□ -0.13
CSNK2A3-201ENST00000528848 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
CSNK2A3-201ENST00000528848 ABCB7O75027 752 aa14.17□□□□□ -0.14
CSNK2A3-201ENST00000528848 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
CSNK2A3-201ENST00000528848 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
CSNK2A3-201ENST00000528848 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
CSNK2A3-201ENST00000528848 DNAJC5Q9H3Z4 198 aa14.1□□□□□ -0.15
CSNK2A3-201ENST00000528848 ABCC8Q09428 1581 aa14.08□□□□□ -0.16
CSNK2A3-201ENST00000528848 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
CSNK2A3-201ENST00000528848 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
CSNK2A3-201ENST00000528848 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
CSNK2A3-201ENST00000528848 WDR97A6NE52 1622 aa14□□□□□ -0.17
CSNK2A3-201ENST00000528848 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
CSNK2A3-201ENST00000528848 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
CSNK2A3-201ENST00000528848 CUX1P39880 1505 aa13.98□□□□□ -0.17
CSNK2A3-201ENST00000528848 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
CSNK2A3-201ENST00000528848 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
CSNK2A3-201ENST00000528848 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
CSNK2A3-201ENST00000528848 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
CSNK2A3-201ENST00000528848 CHD1O14646 1710 aa13.91□□□□□ -0.18
CSNK2A3-201ENST00000528848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
CSNK2A3-201ENST00000528848 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms