RNA–Protein interactions for RNA: ENST00000367152.5

LEMD1-203, Transcript of LEM domain containing 1, humanhuman

TSL 2 BASIC

Gene LEMD1, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-203ENST00000367152 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
LEMD1-203ENST00000367152 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
LEMD1-203ENST00000367152 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
LEMD1-203ENST00000367152 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
LEMD1-203ENST00000367152 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
LEMD1-203ENST00000367152 FOXD1Q16676 465 aa19.99■□□□□ 0.79
LEMD1-203ENST00000367152 PPP6R1Q9UPN7 881 aa19.34■□□□□ 0.69
LEMD1-203ENST00000367152 ADRA2BP18089 450 aa19.31■□□□□ 0.68
LEMD1-203ENST00000367152 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
LEMD1-203ENST00000367152 MSH5O43196 834 aa18.3■□□□□ 0.52
LEMD1-203ENST00000367152 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
LEMD1-203ENST00000367152 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
LEMD1-203ENST00000367152 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
LEMD1-203ENST00000367152 KCNA4P22459 653 aa17.45■□□□□ 0.38
LEMD1-203ENST00000367152 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
LEMD1-203ENST00000367152 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
LEMD1-203ENST00000367152 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
LEMD1-203ENST00000367152 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
LEMD1-203ENST00000367152 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
LEMD1-203ENST00000367152 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
LEMD1-203ENST00000367152 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
LEMD1-203ENST00000367152 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
LEMD1-203ENST00000367152 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
LEMD1-203ENST00000367152 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
LEMD1-203ENST00000367152 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
LEMD1-203ENST00000367152 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
LEMD1-203ENST00000367152 ZBTB22O15209 634 aa16.07■□□□□ 0.16
LEMD1-203ENST00000367152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
LEMD1-203ENST00000367152 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
LEMD1-203ENST00000367152 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
LEMD1-203ENST00000367152 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
LEMD1-203ENST00000367152 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
LEMD1-203ENST00000367152 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
LEMD1-203ENST00000367152 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
LEMD1-203ENST00000367152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
LEMD1-203ENST00000367152 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
LEMD1-203ENST00000367152 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
LEMD1-203ENST00000367152 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
LEMD1-203ENST00000367152 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
LEMD1-203ENST00000367152 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
LEMD1-203ENST00000367152 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
LEMD1-203ENST00000367152 CAPN15O75808 1086 aa15.3■□□□□ 0.04
LEMD1-203ENST00000367152 APLP2Q06481 763 aa15.28■□□□□ 0.04
LEMD1-203ENST00000367152 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
LEMD1-203ENST00000367152 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
LEMD1-203ENST00000367152 ABCB7O75027 752 aa15.07■□□□□ 0
LEMD1-203ENST00000367152 DSG3P32926 999 aa15.02■□□□□ -0
LEMD1-203ENST00000367152 POLA2Q14181 598 aa15.02■□□□□ -0
LEMD1-203ENST00000367152 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
LEMD1-203ENST00000367152 FBLN2P98095 1184 aa14.64□□□□□ -0.07
LEMD1-203ENST00000367152 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
LEMD1-203ENST00000367152 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
LEMD1-203ENST00000367152 FKBP8Q14318 412 aa14.45□□□□□ -0.1
LEMD1-203ENST00000367152 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
LEMD1-203ENST00000367152 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
LEMD1-203ENST00000367152 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
LEMD1-203ENST00000367152 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
LEMD1-203ENST00000367152 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
LEMD1-203ENST00000367152 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
LEMD1-203ENST00000367152 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
LEMD1-203ENST00000367152 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
LEMD1-203ENST00000367152 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
LEMD1-203ENST00000367152 PROM2Q8N271 834 aa14.06□□□□□ -0.16
LEMD1-203ENST00000367152 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
LEMD1-203ENST00000367152 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
LEMD1-203ENST00000367152 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
LEMD1-203ENST00000367152 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
LEMD1-203ENST00000367152 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
LEMD1-203ENST00000367152 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
LEMD1-203ENST00000367152 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
LEMD1-203ENST00000367152 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
LEMD1-203ENST00000367152 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
LEMD1-203ENST00000367152 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
LEMD1-203ENST00000367152 MIER1Q8N108 512 aa13.65□□□□□ -0.22
LEMD1-203ENST00000367152 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
LEMD1-203ENST00000367152 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
LEMD1-203ENST00000367152 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
LEMD1-203ENST00000367152 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
LEMD1-203ENST00000367152 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
LEMD1-203ENST00000367152 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
LEMD1-203ENST00000367152 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
LEMD1-203ENST00000367152 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
LEMD1-203ENST00000367152 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
LEMD1-203ENST00000367152 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
LEMD1-203ENST00000367152 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
LEMD1-203ENST00000367152 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
LEMD1-203ENST00000367152 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
LEMD1-203ENST00000367152 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
LEMD1-203ENST00000367152 NUBP1P53384 320 aa13.27□□□□□ -0.29
LEMD1-203ENST00000367152 POTEHQ6S545 545 aa13.23□□□□□ -0.29
LEMD1-203ENST00000367152 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
LEMD1-203ENST00000367152 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
LEMD1-203ENST00000367152 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
LEMD1-203ENST00000367152 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
LEMD1-203ENST00000367152 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
LEMD1-203ENST00000367152 HAX1O00165 279 aa13.12□□□□□ -0.31
LEMD1-203ENST00000367152 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
LEMD1-203ENST00000367152 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
LEMD1-203ENST00000367152 PKD2Q13563 968 aa13.1□□□□□ -0.31
LEMD1-203ENST00000367152 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms