RNA–Protein interactions for RNA: ENST00000540293.1

AP000619.1-201, humanhuman

BASIC

Gene AP000619.1, Length 1,000 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000619.1-201ENST00000540293 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
AP000619.1-201ENST00000540293 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
AP000619.1-201ENST00000540293 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
AP000619.1-201ENST00000540293 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
AP000619.1-201ENST00000540293 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
AP000619.1-201ENST00000540293 FOXD1Q16676 465 aa18.18■□□□□ 0.5
AP000619.1-201ENST00000540293 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
AP000619.1-201ENST00000540293 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
AP000619.1-201ENST00000540293 ADRA2BP18089 450 aa17.03■□□□□ 0.32
AP000619.1-201ENST00000540293 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
AP000619.1-201ENST00000540293 MSH5O43196 834 aa16.99■□□□□ 0.31
AP000619.1-201ENST00000540293 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
AP000619.1-201ENST00000540293 ABCC9O60706 1549 aa16.62■□□□□ 0.25
AP000619.1-201ENST00000540293 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
AP000619.1-201ENST00000540293 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
AP000619.1-201ENST00000540293 NACADO15069 1562 aa15.92■□□□□ 0.14
AP000619.1-201ENST00000540293 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
AP000619.1-201ENST00000540293 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
AP000619.1-201ENST00000540293 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
AP000619.1-201ENST00000540293 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
AP000619.1-201ENST00000540293 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
AP000619.1-201ENST00000540293 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
AP000619.1-201ENST00000540293 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
AP000619.1-201ENST00000540293 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
AP000619.1-201ENST00000540293 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
AP000619.1-201ENST00000540293 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
AP000619.1-201ENST00000540293 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
AP000619.1-201ENST00000540293 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
AP000619.1-201ENST00000540293 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
AP000619.1-201ENST00000540293 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
AP000619.1-201ENST00000540293 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
AP000619.1-201ENST00000540293 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
AP000619.1-201ENST00000540293 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
AP000619.1-201ENST00000540293 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
AP000619.1-201ENST00000540293 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
AP000619.1-201ENST00000540293 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
AP000619.1-201ENST00000540293 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
AP000619.1-201ENST00000540293 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
AP000619.1-201ENST00000540293 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
AP000619.1-201ENST00000540293 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
AP000619.1-201ENST00000540293 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
AP000619.1-201ENST00000540293 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
AP000619.1-201ENST00000540293 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
AP000619.1-201ENST00000540293 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
AP000619.1-201ENST00000540293 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
AP000619.1-201ENST00000540293 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
AP000619.1-201ENST00000540293 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
AP000619.1-201ENST00000540293 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
AP000619.1-201ENST00000540293 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
AP000619.1-201ENST00000540293 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
AP000619.1-201ENST00000540293 WIZO95785 1651 aa14.49□□□□□ -0.09
AP000619.1-201ENST00000540293 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
AP000619.1-201ENST00000540293 KCNA4P22459 653 aa14.4□□□□□ -0.1
AP000619.1-201ENST00000540293 NESP48681 1621 aa14.38□□□□□ -0.11
AP000619.1-201ENST00000540293 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
AP000619.1-201ENST00000540293 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
AP000619.1-201ENST00000540293 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
AP000619.1-201ENST00000540293 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
AP000619.1-201ENST00000540293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
AP000619.1-201ENST00000540293 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
AP000619.1-201ENST00000540293 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
AP000619.1-201ENST00000540293 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
AP000619.1-201ENST00000540293 CUX2O14529 1486 aa14.19□□□□□ -0.14
AP000619.1-201ENST00000540293 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
AP000619.1-201ENST00000540293 CFTRP13569 1480 aa14.17□□□□□ -0.14
AP000619.1-201ENST00000540293 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
AP000619.1-201ENST00000540293 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
AP000619.1-201ENST00000540293 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
AP000619.1-201ENST00000540293 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
AP000619.1-201ENST00000540293 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
AP000619.1-201ENST00000540293 WDR62O43379 1518 aa14.04□□□□□ -0.16
AP000619.1-201ENST00000540293 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
AP000619.1-201ENST00000540293 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
AP000619.1-201ENST00000540293 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
AP000619.1-201ENST00000540293 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
AP000619.1-201ENST00000540293 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
AP000619.1-201ENST00000540293 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
AP000619.1-201ENST00000540293 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
AP000619.1-201ENST00000540293 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
AP000619.1-201ENST00000540293 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
AP000619.1-201ENST00000540293 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
AP000619.1-201ENST00000540293 CUX1P39880 1505 aa13.74□□□□□ -0.21
AP000619.1-201ENST00000540293 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
AP000619.1-201ENST00000540293 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
AP000619.1-201ENST00000540293 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
AP000619.1-201ENST00000540293 CAPN15O75808 1086 aa13.73□□□□□ -0.21
AP000619.1-201ENST00000540293 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
AP000619.1-201ENST00000540293 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
AP000619.1-201ENST00000540293 SOGA1O94964 1423 aa13.69□□□□□ -0.22
AP000619.1-201ENST00000540293 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
AP000619.1-201ENST00000540293 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
AP000619.1-201ENST00000540293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
AP000619.1-201ENST00000540293 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
AP000619.1-201ENST00000540293 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
AP000619.1-201ENST00000540293 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
AP000619.1-201ENST00000540293 APLP2Q06481 763 aa13.62□□□□□ -0.23
AP000619.1-201ENST00000540293 DSG3P32926 999 aa13.61□□□□□ -0.23
AP000619.1-201ENST00000540293 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
AP000619.1-201ENST00000540293 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
AP000619.1-201ENST00000540293 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms