RNA–Protein interactions for RNA: ENST00000438156.1

LINC02013-201, Transcript of long intergenic non-protein coding RNA 2013, humanhuman

TSL 2 BASIC

Gene LINC02013, Length 526 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02013-201ENST00000438156 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
LINC02013-201ENST00000438156 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
LINC02013-201ENST00000438156 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
LINC02013-201ENST00000438156 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
LINC02013-201ENST00000438156 FOXD1Q16676 465 aa23.14■■□□□ 1.29
LINC02013-201ENST00000438156 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
LINC02013-201ENST00000438156 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
LINC02013-201ENST00000438156 MSH5O43196 834 aa21.62■■□□□ 1.05
LINC02013-201ENST00000438156 PIAS4Q8N2W9 510 aaPredicted RBP21.56■■□□□ 1.04
LINC02013-201ENST00000438156 ADRA2BP18089 450 aa21.55■■□□□ 1.04
LINC02013-201ENST00000438156 POTEDQ86YR6 584 aa21.21■□□□□ 0.99
LINC02013-201ENST00000438156 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
LINC02013-201ENST00000438156 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
LINC02013-201ENST00000438156 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
LINC02013-201ENST00000438156 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
LINC02013-201ENST00000438156 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
LINC02013-201ENST00000438156 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
LINC02013-201ENST00000438156 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
LINC02013-201ENST00000438156 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
LINC02013-201ENST00000438156 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
LINC02013-201ENST00000438156 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
LINC02013-201ENST00000438156 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
LINC02013-201ENST00000438156 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
LINC02013-201ENST00000438156 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
LINC02013-201ENST00000438156 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
LINC02013-201ENST00000438156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC02013-201ENST00000438156 KCNA4P22459 653 aa17.88■□□□□ 0.45
LINC02013-201ENST00000438156 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
LINC02013-201ENST00000438156 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
LINC02013-201ENST00000438156 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
LINC02013-201ENST00000438156 CAPN15O75808 1086 aa17.35■□□□□ 0.37
LINC02013-201ENST00000438156 DSG3P32926 999 aa17.3■□□□□ 0.36
LINC02013-201ENST00000438156 APLP2Q06481 763 aa17.1■□□□□ 0.33
LINC02013-201ENST00000438156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
LINC02013-201ENST00000438156 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
LINC02013-201ENST00000438156 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
LINC02013-201ENST00000438156 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
LINC02013-201ENST00000438156 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
LINC02013-201ENST00000438156 ABCB7O75027 752 aa16.95■□□□□ 0.3
LINC02013-201ENST00000438156 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
LINC02013-201ENST00000438156 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
LINC02013-201ENST00000438156 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
LINC02013-201ENST00000438156 POLA2Q14181 598 aa16.63■□□□□ 0.25
LINC02013-201ENST00000438156 POTEHQ6S545 545 aa16.6■□□□□ 0.25
LINC02013-201ENST00000438156 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
LINC02013-201ENST00000438156 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
LINC02013-201ENST00000438156 ZBTB22O15209 634 aa16.45■□□□□ 0.22
LINC02013-201ENST00000438156 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
LINC02013-201ENST00000438156 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
LINC02013-201ENST00000438156 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
LINC02013-201ENST00000438156 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
LINC02013-201ENST00000438156 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
LINC02013-201ENST00000438156 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
LINC02013-201ENST00000438156 FBLN2P98095 1184 aa15.83■□□□□ 0.12
LINC02013-201ENST00000438156 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
LINC02013-201ENST00000438156 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
LINC02013-201ENST00000438156 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
LINC02013-201ENST00000438156 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
LINC02013-201ENST00000438156 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
LINC02013-201ENST00000438156 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
LINC02013-201ENST00000438156 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC02013-201ENST00000438156 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
LINC02013-201ENST00000438156 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
LINC02013-201ENST00000438156 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
LINC02013-201ENST00000438156 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
LINC02013-201ENST00000438156 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
LINC02013-201ENST00000438156 HAX1O00165 279 aa15.48■□□□□ 0.07
LINC02013-201ENST00000438156 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
LINC02013-201ENST00000438156 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
LINC02013-201ENST00000438156 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
LINC02013-201ENST00000438156 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
LINC02013-201ENST00000438156 EVX2Q03828 476 aa15.34■□□□□ 0.05
LINC02013-201ENST00000438156 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
LINC02013-201ENST00000438156 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
LINC02013-201ENST00000438156 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
LINC02013-201ENST00000438156 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
LINC02013-201ENST00000438156 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
LINC02013-201ENST00000438156 GABBR2O75899 941 aa14.96□□□□□ -0.01
LINC02013-201ENST00000438156 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
LINC02013-201ENST00000438156 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
LINC02013-201ENST00000438156 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
LINC02013-201ENST00000438156 CLCN6P51797 869 aa14.68□□□□□ -0.06
LINC02013-201ENST00000438156 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
LINC02013-201ENST00000438156 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
LINC02013-201ENST00000438156 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
LINC02013-201ENST00000438156 PROM2Q8N271 834 aa14.62□□□□□ -0.07
LINC02013-201ENST00000438156 MNX1P50219 401 aaPredicted RBP14.6□□□□□ -0.07
LINC02013-201ENST00000438156 LHX8Q68G74 356 aa14.59□□□□□ -0.07
LINC02013-201ENST00000438156 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC02013-201ENST00000438156 DCBLD2Q96PD2 775 aa14.51□□□□□ -0.09
LINC02013-201ENST00000438156 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
LINC02013-201ENST00000438156 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
LINC02013-201ENST00000438156 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
LINC02013-201ENST00000438156 MIER1Q8N108 512 aa14.3□□□□□ -0.12
LINC02013-201ENST00000438156 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
LINC02013-201ENST00000438156 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
LINC02013-201ENST00000438156 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
LINC02013-201ENST00000438156 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
LINC02013-201ENST00000438156 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
LINC02013-201ENST00000438156 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms