RNA–Protein interactions for RNA: ENST00000426548.5

GJC1-202, Transcript of gap junction protein gamma 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene GJC1, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJC1-202ENST00000426548 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
GJC1-202ENST00000426548 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
GJC1-202ENST00000426548 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
GJC1-202ENST00000426548 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
GJC1-202ENST00000426548 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
GJC1-202ENST00000426548 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
GJC1-202ENST00000426548 APLP2Q06481 763 aa11.82□□□□□ -0.52
GJC1-202ENST00000426548 ATP1B4Q9UN42 357 aaPredicted RBP11.64□□□□□ -0.55
GJC1-202ENST00000426548 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
GJC1-202ENST00000426548 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
GJC1-202ENST00000426548 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.58
GJC1-202ENST00000426548 ABCC9O60706 1549 aa11.41□□□□□ -0.58
GJC1-202ENST00000426548 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
GJC1-202ENST00000426548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
GJC1-202ENST00000426548 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
GJC1-202ENST00000426548 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
GJC1-202ENST00000426548 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
GJC1-202ENST00000426548 CHIC1Q5VXU3 224 aa11.19□□□□□ -0.62
GJC1-202ENST00000426548 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
GJC1-202ENST00000426548 FBLN2P98095 1184 aa11.09□□□□□ -0.63
GJC1-202ENST00000426548 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
GJC1-202ENST00000426548 ITGAEP38570 1179 aa10.94□□□□□ -0.66
GJC1-202ENST00000426548 CCER1Q8TC90 406 aaPredicted RBP10.93□□□□□ -0.66
GJC1-202ENST00000426548 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
GJC1-202ENST00000426548 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
GJC1-202ENST00000426548 BCANQ96GW7 911 aa10.85□□□□□ -0.67
GJC1-202ENST00000426548 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
GJC1-202ENST00000426548 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
GJC1-202ENST00000426548 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
GJC1-202ENST00000426548 PLPPR3Q6T4P5 718 aa10.79□□□□□ -0.68
GJC1-202ENST00000426548 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
GJC1-202ENST00000426548 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
GJC1-202ENST00000426548 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.69
GJC1-202ENST00000426548 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
GJC1-202ENST00000426548 ARID3CA6NKF2 412 aa10.69□□□□□ -0.7
GJC1-202ENST00000426548 CNGB1Q14028 1251 aaPredicted RBP10.68□□□□□ -0.7
GJC1-202ENST00000426548 ERICH6Q7L0X2 663 aa10.66□□□□□ -0.7
GJC1-202ENST00000426548 NEFLP07196 543 aa10.63□□□□□ -0.71
GJC1-202ENST00000426548 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
GJC1-202ENST00000426548 RB1CC1Q8TDY2 1594 aa10.63□□□□□ -0.71
GJC1-202ENST00000426548 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
GJC1-202ENST00000426548 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
GJC1-202ENST00000426548 SLC24A1O60721 1099 aa10.59□□□□□ -0.71
GJC1-202ENST00000426548 CDK11AQ9UQ88 783 aaPredicted RBP10.58□□□□□ -0.72
GJC1-202ENST00000426548 CENPBP07199 599 aaPredicted RBP10.57□□□□□ -0.72
GJC1-202ENST00000426548 ERCC6Q03468 1493 aa10.57□□□□□ -0.72
GJC1-202ENST00000426548 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
GJC1-202ENST00000426548 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
GJC1-202ENST00000426548 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
GJC1-202ENST00000426548 CHGAP10645 457 aaKnown RBP10.51□□□□□ -0.73
GJC1-202ENST00000426548 YTHDC1Q96MU7 727 aaKnown RBP10.5□□□□□ -0.73
GJC1-202ENST00000426548 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
GJC1-202ENST00000426548 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
GJC1-202ENST00000426548 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
GJC1-202ENST00000426548 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
GJC1-202ENST00000426548 SCAF1Q9H7N4 1312 aaKnown RBP10.45□□□□□ -0.74
GJC1-202ENST00000426548 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
GJC1-202ENST00000426548 NEFMP07197 916 aa10.45□□□□□ -0.74
GJC1-202ENST00000426548 DAXXQ9UER7 740 aaPredicted RBP10.42□□□□□ -0.74
GJC1-202ENST00000426548 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
GJC1-202ENST00000426548 NACADO15069 1562 aa10.37□□□□□ -0.75
GJC1-202ENST00000426548 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
GJC1-202ENST00000426548 A0A0G2JS52 829 aa10.36□□□□□ -0.75
GJC1-202ENST00000426548 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
GJC1-202ENST00000426548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.36□□□□□ -0.75
GJC1-202ENST00000426548 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
GJC1-202ENST00000426548 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
GJC1-202ENST00000426548 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
GJC1-202ENST00000426548 PPP1R15AO75807 674 aaPredicted RBP10.31□□□□□ -0.76
GJC1-202ENST00000426548 BAZ1BQ9UIG0 1483 aaKnown RBP10.31□□□□□ -0.76
GJC1-202ENST00000426548 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
GJC1-202ENST00000426548 ZBTB7CA1YPR0 619 aa10.29□□□□□ -0.76
GJC1-202ENST00000426548 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
GJC1-202ENST00000426548 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
GJC1-202ENST00000426548 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
GJC1-202ENST00000426548 CANXP27824 592 aaKnown RBP10.25□□□□□ -0.77
GJC1-202ENST00000426548 BCL11AQ9H165 835 aa10.25□□□□□ -0.77
GJC1-202ENST00000426548 SENP3Q9H4L4 574 aaPredicted RBP10.24□□□□□ -0.77
GJC1-202ENST00000426548 AEBP2Q6ZN18 517 aaPredicted RBP10.24□□□□□ -0.77
GJC1-202ENST00000426548 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
GJC1-202ENST00000426548 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
GJC1-202ENST00000426548 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
GJC1-202ENST00000426548 MTUS2Q5JR59 1369 aa10.18□□□□□ -0.78
GJC1-202ENST00000426548 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
GJC1-202ENST00000426548 ANP32CO43423 234 aa10.16□□□□□ -0.78
GJC1-202ENST00000426548 MYT1Q01538 1121 aa10.15□□□□□ -0.78
GJC1-202ENST00000426548 MLECQ14165 292 aa10.13□□□□□ -0.79
GJC1-202ENST00000426548 EIF4G1Q04637 1599 aaKnown RBP10.11□□□□□ -0.79
GJC1-202ENST00000426548 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
GJC1-202ENST00000426548 PDS5BQ9NTI5 1447 aa10.09□□□□□ -0.79
GJC1-202ENST00000426548 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
GJC1-202ENST00000426548 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
GJC1-202ENST00000426548 RSF1Q96T23 1441 aaPredicted RBP10.08□□□□□ -0.8
GJC1-202ENST00000426548 TONSLQ96HA7 1378 aa10.08□□□□□ -0.8
GJC1-202ENST00000426548 HRCP23327 699 aa10.06□□□□□ -0.8
GJC1-202ENST00000426548 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
GJC1-202ENST00000426548 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
GJC1-202ENST00000426548 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
GJC1-202ENST00000426548 ARXQ96QS3 562 aa10.03□□□□□ -0.8
GJC1-202ENST00000426548 NPHP1O15259 732 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms