RNA–Protein interactions for RNA: ENST00000556542.1

AL162511.1-201, humanhuman

TSL 4 BASIC

Gene AL162511.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL162511.1-201ENST00000556542 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
AL162511.1-201ENST00000556542 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
AL162511.1-201ENST00000556542 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
AL162511.1-201ENST00000556542 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
AL162511.1-201ENST00000556542 FOXD1Q16676 465 aa20.41■□□□□ 0.86
AL162511.1-201ENST00000556542 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
AL162511.1-201ENST00000556542 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
AL162511.1-201ENST00000556542 ADRA2BP18089 450 aa19.4■□□□□ 0.7
AL162511.1-201ENST00000556542 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
AL162511.1-201ENST00000556542 MSH5O43196 834 aa19.03■□□□□ 0.64
AL162511.1-201ENST00000556542 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
AL162511.1-201ENST00000556542 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
AL162511.1-201ENST00000556542 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
AL162511.1-201ENST00000556542 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
AL162511.1-201ENST00000556542 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
AL162511.1-201ENST00000556542 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
AL162511.1-201ENST00000556542 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
AL162511.1-201ENST00000556542 KCNA4P22459 653 aa17.35■□□□□ 0.37
AL162511.1-201ENST00000556542 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
AL162511.1-201ENST00000556542 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
AL162511.1-201ENST00000556542 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
AL162511.1-201ENST00000556542 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
AL162511.1-201ENST00000556542 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
AL162511.1-201ENST00000556542 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
AL162511.1-201ENST00000556542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.2
AL162511.1-201ENST00000556542 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
AL162511.1-201ENST00000556542 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
AL162511.1-201ENST00000556542 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
AL162511.1-201ENST00000556542 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
AL162511.1-201ENST00000556542 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
AL162511.1-201ENST00000556542 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
AL162511.1-201ENST00000556542 ZBTB22O15209 634 aa15.99■□□□□ 0.15
AL162511.1-201ENST00000556542 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
AL162511.1-201ENST00000556542 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
AL162511.1-201ENST00000556542 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
AL162511.1-201ENST00000556542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
AL162511.1-201ENST00000556542 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
AL162511.1-201ENST00000556542 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
AL162511.1-201ENST00000556542 APLP2Q06481 763 aa15.74■□□□□ 0.11
AL162511.1-201ENST00000556542 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
AL162511.1-201ENST00000556542 CAPN15O75808 1086 aa15.57■□□□□ 0.08
AL162511.1-201ENST00000556542 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
AL162511.1-201ENST00000556542 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
AL162511.1-201ENST00000556542 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
AL162511.1-201ENST00000556542 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
AL162511.1-201ENST00000556542 DSG3P32926 999 aa15.34■□□□□ 0.05
AL162511.1-201ENST00000556542 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
AL162511.1-201ENST00000556542 ABCB7O75027 752 aa15.21■□□□□ 0.03
AL162511.1-201ENST00000556542 POLA2Q14181 598 aa15.11■□□□□ 0.01
AL162511.1-201ENST00000556542 ZBTB12Q9Y330 459 aaPredicted RBP14.96□□□□□ -0.01
AL162511.1-201ENST00000556542 ABCC9O60706 1549 aa14.81□□□□□ -0.04
AL162511.1-201ENST00000556542 FBLN2P98095 1184 aa14.77□□□□□ -0.05
AL162511.1-201ENST00000556542 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
AL162511.1-201ENST00000556542 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
AL162511.1-201ENST00000556542 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
AL162511.1-201ENST00000556542 CCDC180Q9P1Z9 1646 aa14.53□□□□□ -0.08
AL162511.1-201ENST00000556542 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
AL162511.1-201ENST00000556542 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
AL162511.1-201ENST00000556542 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
AL162511.1-201ENST00000556542 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
AL162511.1-201ENST00000556542 FKBP8Q14318 412 aa14.44□□□□□ -0.1
AL162511.1-201ENST00000556542 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
AL162511.1-201ENST00000556542 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
AL162511.1-201ENST00000556542 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
AL162511.1-201ENST00000556542 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
AL162511.1-201ENST00000556542 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
AL162511.1-201ENST00000556542 CHRDL2Q6WN34 429 aa14.14□□□□□ -0.15
AL162511.1-201ENST00000556542 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
AL162511.1-201ENST00000556542 PROM2Q8N271 834 aa14.11□□□□□ -0.15
AL162511.1-201ENST00000556542 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
AL162511.1-201ENST00000556542 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
AL162511.1-201ENST00000556542 POTEHQ6S545 545 aa13.99□□□□□ -0.17
AL162511.1-201ENST00000556542 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
AL162511.1-201ENST00000556542 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
AL162511.1-201ENST00000556542 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
AL162511.1-201ENST00000556542 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
AL162511.1-201ENST00000556542 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
AL162511.1-201ENST00000556542 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
AL162511.1-201ENST00000556542 NACADO15069 1562 aa13.81□□□□□ -0.2
AL162511.1-201ENST00000556542 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
AL162511.1-201ENST00000556542 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
AL162511.1-201ENST00000556542 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
AL162511.1-201ENST00000556542 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
AL162511.1-201ENST00000556542 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
AL162511.1-201ENST00000556542 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
AL162511.1-201ENST00000556542 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
AL162511.1-201ENST00000556542 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
AL162511.1-201ENST00000556542 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
AL162511.1-201ENST00000556542 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
AL162511.1-201ENST00000556542 HAX1O00165 279 aa13.53□□□□□ -0.24
AL162511.1-201ENST00000556542 MIER1Q8N108 512 aa13.52□□□□□ -0.25
AL162511.1-201ENST00000556542 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
AL162511.1-201ENST00000556542 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
AL162511.1-201ENST00000556542 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
AL162511.1-201ENST00000556542 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
AL162511.1-201ENST00000556542 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
AL162511.1-201ENST00000556542 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
AL162511.1-201ENST00000556542 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
AL162511.1-201ENST00000556542 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
AL162511.1-201ENST00000556542 EVX2Q03828 476 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms