RNA–Protein interactions for RNA: ENST00000417700.6

RMDN2-207, Transcript of regulator of microtubule dynamics 2, humanhuman

TSL 1 (best) BASIC

Gene RMDN2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN2-207ENST00000417700 AEBP2Q6ZN18 517 aaPredicted RBP29.6■■■□□ 2.33
RMDN2-207ENST00000417700 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.07
RMDN2-207ENST00000417700 SENP3Q9H4L4 574 aaPredicted RBP25.24■■□□□ 1.63
RMDN2-207ENST00000417700 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
RMDN2-207ENST00000417700 FOXD1Q16676 465 aa23.56■■□□□ 1.36
RMDN2-207ENST00000417700 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
RMDN2-207ENST00000417700 MSH5O43196 834 aa22.09■■□□□ 1.13
RMDN2-207ENST00000417700 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
RMDN2-207ENST00000417700 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
RMDN2-207ENST00000417700 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
RMDN2-207ENST00000417700 ADRA2BP18089 450 aa21.82■■□□□ 1.08
RMDN2-207ENST00000417700 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
RMDN2-207ENST00000417700 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
RMDN2-207ENST00000417700 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
RMDN2-207ENST00000417700 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
RMDN2-207ENST00000417700 HOXD11P31277 338 aaPredicted RBP19.22■□□□□ 0.67
RMDN2-207ENST00000417700 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
RMDN2-207ENST00000417700 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
RMDN2-207ENST00000417700 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
RMDN2-207ENST00000417700 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
RMDN2-207ENST00000417700 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
RMDN2-207ENST00000417700 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
RMDN2-207ENST00000417700 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
RMDN2-207ENST00000417700 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
RMDN2-207ENST00000417700 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
RMDN2-207ENST00000417700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.51
RMDN2-207ENST00000417700 KCNA4P22459 653 aa17.93■□□□□ 0.46
RMDN2-207ENST00000417700 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
RMDN2-207ENST00000417700 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
RMDN2-207ENST00000417700 SLC4A2P04920 1241 aa17.64■□□□□ 0.42
RMDN2-207ENST00000417700 CAPN15O75808 1086 aa17.64■□□□□ 0.41
RMDN2-207ENST00000417700 DSG3P32926 999 aa17.59■□□□□ 0.41
RMDN2-207ENST00000417700 APLP2Q06481 763 aa17.36■□□□□ 0.37
RMDN2-207ENST00000417700 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
RMDN2-207ENST00000417700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
RMDN2-207ENST00000417700 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
RMDN2-207ENST00000417700 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
RMDN2-207ENST00000417700 ABCB7O75027 752 aa17.22■□□□□ 0.35
RMDN2-207ENST00000417700 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.34
RMDN2-207ENST00000417700 POTEHQ6S545 545 aa17.07■□□□□ 0.32
RMDN2-207ENST00000417700 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
RMDN2-207ENST00000417700 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
RMDN2-207ENST00000417700 POLA2Q14181 598 aa16.82■□□□□ 0.28
RMDN2-207ENST00000417700 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
RMDN2-207ENST00000417700 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
RMDN2-207ENST00000417700 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
RMDN2-207ENST00000417700 ZBTB22O15209 634 aa16.5■□□□□ 0.23
RMDN2-207ENST00000417700 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
RMDN2-207ENST00000417700 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
RMDN2-207ENST00000417700 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
RMDN2-207ENST00000417700 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
RMDN2-207ENST00000417700 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
RMDN2-207ENST00000417700 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
RMDN2-207ENST00000417700 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
RMDN2-207ENST00000417700 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
RMDN2-207ENST00000417700 FBLN2P98095 1184 aa16■□□□□ 0.15
RMDN2-207ENST00000417700 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
RMDN2-207ENST00000417700 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
RMDN2-207ENST00000417700 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
RMDN2-207ENST00000417700 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
RMDN2-207ENST00000417700 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
RMDN2-207ENST00000417700 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
RMDN2-207ENST00000417700 HAX1O00165 279 aa15.78■□□□□ 0.12
RMDN2-207ENST00000417700 SSUH2Q9Y2M2 353 aa15.76■□□□□ 0.11
RMDN2-207ENST00000417700 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
RMDN2-207ENST00000417700 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
RMDN2-207ENST00000417700 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
RMDN2-207ENST00000417700 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
RMDN2-207ENST00000417700 EVX2Q03828 476 aa15.61■□□□□ 0.09
RMDN2-207ENST00000417700 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RMDN2-207ENST00000417700 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
RMDN2-207ENST00000417700 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
RMDN2-207ENST00000417700 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
RMDN2-207ENST00000417700 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
RMDN2-207ENST00000417700 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
RMDN2-207ENST00000417700 GABBR2O75899 941 aa15.25■□□□□ 0.03
RMDN2-207ENST00000417700 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
RMDN2-207ENST00000417700 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
RMDN2-207ENST00000417700 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
RMDN2-207ENST00000417700 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
RMDN2-207ENST00000417700 CREBZFQ9NS37 354 aa15.02■□□□□ -0
RMDN2-207ENST00000417700 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
RMDN2-207ENST00000417700 CLCN6P51797 869 aa14.94□□□□□ -0.02
RMDN2-207ENST00000417700 LHX8Q68G74 356 aa14.93□□□□□ -0.02
RMDN2-207ENST00000417700 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
RMDN2-207ENST00000417700 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
RMDN2-207ENST00000417700 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.04
RMDN2-207ENST00000417700 MNX1P50219 401 aaPredicted RBP14.75□□□□□ -0.05
RMDN2-207ENST00000417700 GALR2O43603 387 aaPredicted RBP14.72□□□□□ -0.05
RMDN2-207ENST00000417700 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
RMDN2-207ENST00000417700 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
RMDN2-207ENST00000417700 PROM2Q8N271 834 aa14.7□□□□□ -0.06
RMDN2-207ENST00000417700 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
RMDN2-207ENST00000417700 MS4A3Q96HJ5 214 aa14.48□□□□□ -0.09
RMDN2-207ENST00000417700 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
RMDN2-207ENST00000417700 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
RMDN2-207ENST00000417700 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
RMDN2-207ENST00000417700 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
RMDN2-207ENST00000417700 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
RMDN2-207ENST00000417700 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms