RNA–Protein interactions for RNA: ENST00000505667.5

PALLD-206, Transcript of palladin, cytoskeletal associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PALLD, Length 3,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-206ENST00000505667 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
PALLD-206ENST00000505667 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
PALLD-206ENST00000505667 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
PALLD-206ENST00000505667 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
PALLD-206ENST00000505667 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
PALLD-206ENST00000505667 ABCC9O60706 1549 aa15.6■□□□□ 0.09
PALLD-206ENST00000505667 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
PALLD-206ENST00000505667 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
PALLD-206ENST00000505667 NACADO15069 1562 aa15.25■□□□□ 0.03
PALLD-206ENST00000505667 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
PALLD-206ENST00000505667 SCRIBQ14160 1630 aa15.03■□□□□ -0
PALLD-206ENST00000505667 SHROOM4Q9ULL8 1493 aa15.02□□□□□ -0.01
PALLD-206ENST00000505667 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
PALLD-206ENST00000505667 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
PALLD-206ENST00000505667 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
PALLD-206ENST00000505667 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
PALLD-206ENST00000505667 WIZO95785 1651 aa14.82□□□□□ -0.04
PALLD-206ENST00000505667 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
PALLD-206ENST00000505667 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
PALLD-206ENST00000505667 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
PALLD-206ENST00000505667 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
PALLD-206ENST00000505667 TOP2AP11388 1531 aaKnown RBP14.69□□□□□ -0.06
PALLD-206ENST00000505667 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
PALLD-206ENST00000505667 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
PALLD-206ENST00000505667 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.1
PALLD-206ENST00000505667 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
PALLD-206ENST00000505667 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
PALLD-206ENST00000505667 KIF21BO75037 1637 aa14.24□□□□□ -0.13
PALLD-206ENST00000505667 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
PALLD-206ENST00000505667 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
PALLD-206ENST00000505667 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
PALLD-206ENST00000505667 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
PALLD-206ENST00000505667 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
PALLD-206ENST00000505667 ATAD2BQ9ULI0 1458 aa14.12□□□□□ -0.15
PALLD-206ENST00000505667 HRCP23327 699 aa14.11□□□□□ -0.15
PALLD-206ENST00000505667 EEA1Q15075 1411 aa14.01□□□□□ -0.17
PALLD-206ENST00000505667 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
PALLD-206ENST00000505667 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
PALLD-206ENST00000505667 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
PALLD-206ENST00000505667 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
PALLD-206ENST00000505667 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
PALLD-206ENST00000505667 RUSC2Q8N2Y8 1516 aa13.91□□□□□ -0.18
PALLD-206ENST00000505667 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
PALLD-206ENST00000505667 SOGA1O94964 1423 aa13.86□□□□□ -0.19
PALLD-206ENST00000505667 CUX1P39880 1505 aa13.85□□□□□ -0.19
PALLD-206ENST00000505667 TNIKQ9UKE5 1360 aa13.85□□□□□ -0.19
PALLD-206ENST00000505667 CFTRP13569 1480 aa13.83□□□□□ -0.2
PALLD-206ENST00000505667 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
PALLD-206ENST00000505667 GOLGA3Q08378 1498 aa13.78□□□□□ -0.2
PALLD-206ENST00000505667 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
PALLD-206ENST00000505667 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
PALLD-206ENST00000505667 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
PALLD-206ENST00000505667 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
PALLD-206ENST00000505667 LRRIQ1Q96JM4 1722 aa13.7□□□□□ -0.22
PALLD-206ENST00000505667 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
PALLD-206ENST00000505667 CUX2O14529 1486 aa13.69□□□□□ -0.22
PALLD-206ENST00000505667 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
PALLD-206ENST00000505667 CTTNBP2Q8WZ74 1663 aa13.65□□□□□ -0.22
PALLD-206ENST00000505667 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
PALLD-206ENST00000505667 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
PALLD-206ENST00000505667 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
PALLD-206ENST00000505667 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
PALLD-206ENST00000505667 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
PALLD-206ENST00000505667 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
PALLD-206ENST00000505667 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
PALLD-206ENST00000505667 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
PALLD-206ENST00000505667 CUL7Q14999 1698 aa13.57□□□□□ -0.24
PALLD-206ENST00000505667 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
PALLD-206ENST00000505667 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
PALLD-206ENST00000505667 CLIP1P30622 1438 aa13.54□□□□□ -0.24
PALLD-206ENST00000505667 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
PALLD-206ENST00000505667 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
PALLD-206ENST00000505667 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
PALLD-206ENST00000505667 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
PALLD-206ENST00000505667 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
PALLD-206ENST00000505667 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
PALLD-206ENST00000505667 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
PALLD-206ENST00000505667 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
PALLD-206ENST00000505667 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
PALLD-206ENST00000505667 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
PALLD-206ENST00000505667 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
PALLD-206ENST00000505667 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
PALLD-206ENST00000505667 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
PALLD-206ENST00000505667 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
PALLD-206ENST00000505667 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
PALLD-206ENST00000505667 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
PALLD-206ENST00000505667 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
PALLD-206ENST00000505667 SNAPC4Q5SXM2 1469 aa13.35□□□□□ -0.27
PALLD-206ENST00000505667 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
PALLD-206ENST00000505667 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
PALLD-206ENST00000505667 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
PALLD-206ENST00000505667 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
PALLD-206ENST00000505667 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
PALLD-206ENST00000505667 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
PALLD-206ENST00000505667 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
PALLD-206ENST00000505667 IGF1RP08069 1367 aa13.28□□□□□ -0.28
PALLD-206ENST00000505667 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
PALLD-206ENST00000505667 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
PALLD-206ENST00000505667 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
PALLD-206ENST00000505667 KDM5BQ9UGL1 1544 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms