Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 AL162377.1-201ENST00000618844 1793 ntBASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPGRIP1Q96KN7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC010331.1-201ENST00000611423 582 ntBASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RPGRIP1Q96KN7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.97■■□□□ 1.11
RPGRIP1Q96KN7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 SNORA78-201ENST00000459373 127 ntBASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 PCDHAC2-203ENST00000615316 3011 ntBASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.96■■□□□ 1.11
RPGRIP1Q96KN7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
RPGRIP1Q96KN7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 Z99916.2-201ENST00000604037 246 ntBASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.95■■□□□ 1.1
RPGRIP1Q96KN7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 AL355472.2-201ENST00000422958 438 ntBASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPGRIP1Q96KN7 KRT16P2-201ENST00000414673 1423 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms