Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM43Q96BQ3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM43Q96BQ3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
TRIM43Q96BQ3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM43Q96BQ3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM43Q96BQ3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 HMGA1P5-201ENST00000412453 271 ntBASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 AC004980.1-204ENST00000429707 299 ntBASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 DUSP5P1-201ENST00000441325 1139 ntBASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM43Q96BQ3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 AC026396.1-201ENST00000419388 421 ntBASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 YBX1P2-201ENST00000489612 999 ntBASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM43Q96BQ3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 TSPY5P-201ENST00000426936 936 ntBASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM43Q96BQ3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM43Q96BQ3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 FAM86EP-206ENST00000510506 987 ntBASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 SLC25A1P4-201ENST00000567977 778 ntBASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM43Q96BQ3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM43Q96BQ3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms