Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.52■□□□□ 0.39
RAB40AQ8WXH6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 CDCA4P2-201ENST00000441182 718 ntBASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40AQ8WXH6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 UBE2DNL-204ENST00000602536 740 ntBASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40AQ8WXH6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 AC026185.1-201ENST00000445748 174 ntBASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40AQ8WXH6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 AC004408.2-201ENST00000623613 2777 ntBASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 MFSD11-216ENST00000590393 1141 ntBASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 MYCNOS-205ENST00000641950 531 ntBASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms