Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 AC013268.1-206ENST00000638368 961 ntBASIC20.68■□□□□ 0.9
CCDC89Q8N998 AC112229.1-201ENST00000639295 961 ntBASIC20.68■□□□□ 0.9
CCDC89Q8N998 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.68■□□□□ 0.9
CCDC89Q8N998 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC89Q8N998 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 AC087289.5-201ENST00000586076 3175 ntBASIC20.68■□□□□ 0.9
CCDC89Q8N998 CYP21A1P-202ENST00000354927 1481 ntBASIC20.68■□□□□ 0.9
CCDC89Q8N998 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC89Q8N998 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CCDC89Q8N998 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC89Q8N998 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC89Q8N998 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC89Q8N998 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC89Q8N998 BX323043.1-201ENST00000641006 1765 ntBASIC20.67■□□□□ 0.9
CCDC89Q8N998 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
CCDC89Q8N998 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 AC018445.3-201ENST00000624177 1945 ntBASIC20.66■□□□□ 0.9
CCDC89Q8N998 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 AL162412.1-201ENST00000567129 965 ntBASIC20.66■□□□□ 0.9
CCDC89Q8N998 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC89Q8N998 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC89Q8N998 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.65■□□□□ 0.9
CCDC89Q8N998 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 AC007322.4-201ENST00000509611 723 ntBASIC20.65■□□□□ 0.9
CCDC89Q8N998 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 AC137761.2-201ENST00000561729 223 ntBASIC20.65■□□□□ 0.9
CCDC89Q8N998 AC145350.3-201ENST00000569033 163 ntBASIC20.65■□□□□ 0.9
CCDC89Q8N998 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms