Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
LINC00173Q6ZV60 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 AC139713.2-201ENST00000641328 2723 ntBASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 KRT125P-201ENST00000546827 989 ntBASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00173Q6ZV60 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 AC068880.1-201ENST00000507289 2297 ntBASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00173Q6ZV60 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 MIR4787-201ENST00000607364 84 ntBASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms