Protein–RNA interactions for Protein: P53962

YNL035C, Uncharacterized WD repeat-containing protein YNL035C, yeastyeast

Known RBP Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL035CP53962 NUM1YDR150W 8247 nt2.65□□□□□ -1.99
YNL035CP53962 IRE1YHR079C 3348 nt2.65□□□□□ -1.99
YNL035CP53962 NUT1YGL151W 3399 nt2.64□□□□□ -1.99
YNL035CP53962 SYH1YPL105C 2550 nt2.64□□□□□ -1.99
YNL035CP53962 TFC3YAL001C 3483 nt2.64□□□□□ -1.99
YNL035CP53962 CHC1YGL206C 4962 nt2.64□□□□□ -1.99
YNL035CP53962 YOR055WYOR055W 435 nt2.63□□□□□ -1.99
YNL035CP53962 snR14snR14 160 nt2.63□□□□□ -1.99
YNL035CP53962 UBR1YGR184C 5853 nt2.61□□□□□ -1.99
YNL035CP53962 IRA2YOL081W 9240 nt2.61□□□□□ -1.99
YNL035CP53962 YJL052C-AYJL052C-A 120 nt2.6□□□□□ -1.99
YNL035CP53962 SPF1YEL031W 3648 nt2.6□□□□□ -1.99
YNL035CP53962 PDR1YGL013C 3207 nt2.58□□□□□ -2
YNL035CP53962 BCK1YJL095W 4437 nt2.58□□□□□ -2
YNL035CP53962 CSE1YGL238W 2883 nt2.57□□□□□ -2
YNL035CP53962 PDR11YIL013C 4236 nt2.57□□□□□ -2
YNL035CP53962 HIR3YJR140C 4947 nt2.57□□□□□ -2
YNL035CP53962 YOL098CYOL098C 3114 nt2.57□□□□□ -2
YNL035CP53962 SPC110YDR356W 2835 nt2.57□□□□□ -2
YNL035CP53962 TOR1YJR066W 7413 nt2.57□□□□□ -2
YNL035CP53962 TUS1YLR425W 3924 nt2.57□□□□□ -2
YNL035CP53962 BUL2YML111W 2763 nt2.56□□□□□ -2
YNL035CP53962 NST1YNL091W 3723 nt2.55□□□□□ -2
YNL035CP53962 RTT101YJL047C 2529 nt2.54□□□□□ -2
YNL035CP53962 SXM1YDR395W 2835 nt2.54□□□□□ -2
YNL035CP53962 VPS13YLL040C 9435 nt2.54□□□□□ -2
YNL035CP53962 TRA1YHR099W 11235 nt2.53□□□□□ -2
YNL035CP53962 snR40snR40 97 nt2.53□□□□□ -2
YNL035CP53962 STO1YMR125W 2586 nt2.53□□□□□ -2.01
YNL035CP53962 PET309YLR067C 2898 nt2.52□□□□□ -2.01
YNL035CP53962 KOG1YHR186C 4674 nt2.5□□□□□ -2.01
YNL035CP53962 YPL060C-AYPL060C-A 3315 nt2.5□□□□□ -2.01
YNL035CP53962 RAD50YNL250W 3939 nt2.49□□□□□ -2.01
YNL035CP53962 ULP2YIL031W 3105 nt2.49□□□□□ -2.01
YNL035CP53962 MSB1YOR188W 3414 nt2.47□□□□□ -2.01
YNL035CP53962 UTP21YLR409C 2820 nt2.46□□□□□ -2.01
YNL035CP53962 UBP2YOR124C 3819 nt2.46□□□□□ -2.02
YNL035CP53962 YDL114W-AYDL114W-A 114 nt2.46□□□□□ -2.02
YNL035CP53962 PRP16YKR086W 3216 nt2.46□□□□□ -2.02
YNL035CP53962 YLR419WYLR419W 4308 nt2.46□□□□□ -2.02
YNL035CP53962 GIP3YPL137C 3831 nt2.45□□□□□ -2.02
YNL035CP53962 BNI1YNL271C 5862 nt2.45□□□□□ -2.02
YNL035CP53962 tN(GUU)QtN(GUU)Q 71 nt2.45□□□□□ -2.02
YNL035CP53962 SSD1YDR293C 3753 nt2.44□□□□□ -2.02
YNL035CP53962 GEA1YJR031C 4227 nt2.43□□□□□ -2.02
YNL035CP53962 FAR11YNL127W 2862 nt2.42□□□□□ -2.02
YNL035CP53962 DGR1YNL130C-A 147 nt2.42□□□□□ -2.02
YNL035CP53962 KIP1YBL063W 3336 nt2.42□□□□□ -2.02
YNL035CP53962 MSH6YDR097C 3729 nt2.42□□□□□ -2.02
YNL035CP53962 PAU12YGR294W 363 nt2.41□□□□□ -2.02
YNL035CP53962 PSD2YGR170W 3417 nt2.41□□□□□ -2.02
YNL035CP53962 GEA2YEL022W 4380 nt2.41□□□□□ -2.02
YNL035CP53962 YSP1YHR155W 3687 nt2.4□□□□□ -2.02
YNL035CP53962 IRC20YLR247C 4671 nt2.4□□□□□ -2.03
YNL035CP53962 HUG1YML058W-A 207 nt2.39□□□□□ -2.03
YNL035CP53962 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
YNL035CP53962 SEC31YDL195W 3822 nt2.38□□□□□ -2.03
YNL035CP53962 RAV1YJR033C 4074 nt2.38□□□□□ -2.03
YNL035CP53962 SEC8YPR055W 3198 nt2.38□□□□□ -2.03
YNL035CP53962 TDA9YML081W 3756 nt2.37□□□□□ -2.03
YNL035CP53962 tV(UAC)QtV(UAC)Q 76 nt2.37□□□□□ -2.03
YNL035CP53962 TOP2YNL088W 4287 nt2.37□□□□□ -2.03
YNL035CP53962 YJL077W-AYJL077W-A 87 nt2.36□□□□□ -2.03
YNL035CP53962 MSH3YCR092C 3057 nt2.36□□□□□ -2.03
YNL035CP53962 BPH1YCR032W 6504 nt2.35□□□□□ -2.03
YNL035CP53962 YLR422WYLR422W 5799 nt2.35□□□□□ -2.03
YNL035CP53962 KAP122YGL016W 3246 nt2.34□□□□□ -2.03
YNL035CP53962 SEC16YPL085W 6588 nt2.33□□□□□ -2.04
YNL035CP53962 INO80YGL150C 4470 nt2.32□□□□□ -2.04
YNL035CP53962 tQ(UUG)QtQ(UUG)Q 76 nt2.31□□□□□ -2.04
YNL035CP53962 YLR399W-AYLR399W-A 105 nt2.31□□□□□ -2.04
YNL035CP53962 UTP22YGR090W 3714 nt2.31□□□□□ -2.04
YNL035CP53962 SPP41YDR464W 4308 nt2.3□□□□□ -2.04
YNL035CP53962 SMC4YLR086W 4257 nt2.29□□□□□ -2.04
YNL035CP53962 SEC3YER008C 4011 nt2.28□□□□□ -2.04
YNL035CP53962 MSN5YDR335W 3675 nt2.28□□□□□ -2.05
YNL035CP53962 YHR214C-BYHR214C-B 5382 nt2.27□□□□□ -2.05
YNL035CP53962 UBR2YLR024C 5619 nt2.26□□□□□ -2.05
YNL035CP53962 KRE33YNL132W 3171 nt2.25□□□□□ -2.05
YNL035CP53962 FIG2YCR089W 4830 nt2.25□□□□□ -2.05
YNL035CP53962 CAT8YMR280C 4302 nt2.25□□□□□ -2.05
YNL035CP53962 YOR093CYOR093C 4947 nt2.23□□□□□ -2.05
YNL035CP53962 YCS4YLR272C 3531 nt2.23□□□□□ -2.05
YNL035CP53962 FYV8YGR196C 2454 nt2.23□□□□□ -2.05
YNL035CP53962 YHR180W-AYHR180W-A 183 nt2.23□□□□□ -2.05
YNL035CP53962 NEO1YIL048W 3456 nt2.22□□□□□ -2.05
YNL035CP53962 YER090C-AYER090C-A 90 nt2.21□□□□□ -2.06
YNL035CP53962 MYO4YAL029C 4416 nt2.2□□□□□ -2.06
YNL035CP53962 CDC25YLR310C 4770 nt2.2□□□□□ -2.06
YNL035CP53962 APL3YBL037W 3078 nt2.18□□□□□ -2.06
YNL035CP53962 CSF1YLR087C 8877 nt2.17□□□□□ -2.06
YNL035CP53962 YNL054W-BYNL054W-B 5250 nt2.16□□□□□ -2.06
YNL035CP53962 YKL106C-AYKL106C-A 120 nt2.15□□□□□ -2.07
YNL035CP53962 DNF3YMR162C 4971 nt2.15□□□□□ -2.07
YNL035CP53962 PMD1YER132C 5262 nt2.13□□□□□ -2.07
YNL035CP53962 FAB1YFR019W 6837 nt2.13□□□□□ -2.07
YNL035CP53962 ATG9YDL149W 2994 nt2.13□□□□□ -2.07
YNL035CP53962 HER1YOR227W 3741 nt2.12□□□□□ -2.07
YNL035CP53962 FKS1YLR342W 5631 nt2.12□□□□□ -2.07
YNL035CP53962 YLL006W-AYLL006W-A 177 nt2.1□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 121.9 ms