RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C FAP1P53971 965 aa4.61□□□□□ -1.67
RTT101YJL047C DRS1P32892 752 aaKnown RBP4.5□□□□□ -1.69
RTT101YJL047C PRY3P47033 881 aa4.39□□□□□ -1.71
RTT101YJL047C MTC1P47018 478 aaKnown RBP4.38□□□□□ -1.71
RTT101YJL047C YCK3P39962 524 aa4.21□□□□□ -1.74
RTT101YJL047C TFA1P36100 482 aa4.17□□□□□ -1.74
RTT101YJL047C BFR2Q06631 534 aaKnown RBP4.09□□□□□ -1.75
RTT101YJL047C HAA1Q12753 694 aaKnown RBP4.06□□□□□ -1.76
RTT101YJL047C AAD16Q02895 342 aa4.02□□□□□ -1.77
RTT101YJL047C PRI1P10363 409 aa3.96□□□□□ -1.77
RTT101YJL047C RQC2Q12532 1038 aaKnown RBP3.91□□□□□ -1.78
RTT101YJL047C TAF7Q05021 590 aa3.82□□□□□ -1.8
RTT101YJL047C AVT3P36062 692 aa3.77□□□□□ -1.81
RTT101YJL047C TSR3Q12094 313 aaKnown RBP3.7□□□□□ -1.82
RTT101YJL047C BUD31P25337 157 aaPredicted RBP3.69□□□□□ -1.82
RTT101YJL047C DIP2Q12220 943 aaPredicted RBP3.69□□□□□ -1.82
RTT101YJL047C DMA1P38823 416 aa3.64□□□□□ -1.83
RTT101YJL047C YGL015CP33199 130 aa3.61□□□□□ -1.83
RTT101YJL047C RPG1P38249 964 aaKnown RBP3.6□□□□□ -1.83
RTT101YJL047C ISW2Q08773 1120 aa3.59□□□□□ -1.84
RTT101YJL047C MRPL32P25348 183 aa3.52□□□□□ -1.85
RTT101YJL047C LEO1P38439 464 aa3.5□□□□□ -1.85
RTT101YJL047C RSE1Q04693 1361 aaKnown RBP3.45□□□□□ -1.86
RTT101YJL047C SIS1P25294 352 aaKnown RBP3.4□□□□□ -1.87
RTT101YJL047C PTP3P40048 928 aa3.37□□□□□ -1.87
RTT101YJL047C SPT21P35209 758 aa3.34□□□□□ -1.88
RTT101YJL047C RPL17AP05740 184 aaKnown RBP3.33□□□□□ -1.88
RTT101YJL047C RPL17BP46990 184 aaKnown RBP3.33□□□□□ -1.88
RTT101YJL047C LEU3P08638 886 aa3.32□□□□□ -1.88
RTT101YJL047C ABP1P15891 592 aaKnown RBP3.3□□□□□ -1.88
RTT101YJL047C DMA2P53924 522 aa3.28□□□□□ -1.88
RTT101YJL047C SAS10Q12136 610 aaPredicted RBP3.27□□□□□ -1.89
RTT101YJL047C CDC27P38042 758 aa3.26□□□□□ -1.89
RTT101YJL047C REB1P21538 810 aa3.25□□□□□ -1.89
RTT101YJL047C YKR023WP36119 530 aaKnown RBP3.24□□□□□ -1.89
RTT101YJL047C MAP2P38174 421 aaKnown RBP3.23□□□□□ -1.89
RTT101YJL047C UBP10P53874 792 aaPredicted RBP3.23□□□□□ -1.89
RTT101YJL047C RIM101P33400 625 aa3.23□□□□□ -1.89
RTT101YJL047C SSP1P38871 571 aa3.22□□□□□ -1.89
RTT101YJL047C UBP9P39967 754 aa3.22□□□□□ -1.89
RTT101YJL047C IFH1P39520 1085 aa3.21□□□□□ -1.9
RTT101YJL047C RPN1P38764 993 aaKnown RBP3.17□□□□□ -1.9
RTT101YJL047C RLF2Q12495 606 aa3.17□□□□□ -1.9
RTT101YJL047C OXP1P28273 1286 aa3.16□□□□□ -1.9
RTT101YJL047C DCD1P06773 312 aa3.15□□□□□ -1.91
RTT101YJL047C IOC4Q04213 475 aa3.15□□□□□ -1.91
RTT101YJL047C TFC8Q12308 588 aa3.14□□□□□ -1.91
RTT101YJL047C ORC1P54784 914 aaPredicted RBP3.13□□□□□ -1.91
RTT101YJL047C HOP09932 586 aa3.12□□□□□ -1.91
RTT101YJL047C NAP1P25293 417 aaKnown RBP3.12□□□□□ -1.91
RTT101YJL047C YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
RTT101YJL047C TGL3P40308 642 aa3.11□□□□□ -1.91
RTT101YJL047C CKB1P43639 278 aa3.1□□□□□ -1.91
RTT101YJL047C YLR271WQ06152 274 aa3.1□□□□□ -1.91
RTT101YJL047C TIF4632P39936 914 aaKnown RBP3.08□□□□□ -1.92
RTT101YJL047C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92 RIP-Chip
RTT101YJL047C AIM44Q99299 758 aa3.08□□□□□ -1.92
RTT101YJL047C BCH2P36122 765 aa3.06□□□□□ -1.92
RTT101YJL047C YML020WQ03722 664 aa3.06□□□□□ -1.92
RTT101YJL047C CST9Q06032 482 aa3.04□□□□□ -1.92
RTT101YJL047C SPB4P25808 606 aaPredicted RBP3.04□□□□□ -1.92
RTT101YJL047C MGA2P40578 1113 aa3.04□□□□□ -1.92
RTT101YJL047C NOP8Q08287 484 aaPredicted RBP3.03□□□□□ -1.92
RTT101YJL047C KIN1P13185 1064 aa3.01□□□□□ -1.93
RTT101YJL047C VPS70P47161 811 aa3.01□□□□□ -1.93
RTT101YJL047C SCY1P53009 804 aa3.01□□□□□ -1.93
RTT101YJL047C SLX5P32828 619 aaKnown RBP3□□□□□ -1.93
RTT101YJL047C YPR148CQ06523 435 aa3□□□□□ -1.93
RTT101YJL047C YIL055CP40523 627 aaKnown RBP2.99□□□□□ -1.93
RTT101YJL047C RAM2P29703 316 aa2.98□□□□□ -1.93
RTT101YJL047C SET1P38827 1080 aaKnown RBP2.98□□□□□ -1.93
RTT101YJL047C SLX8P40072 274 aa2.97□□□□□ -1.93
RTT101YJL047C RSM7P47150 247 aa2.97□□□□□ -1.93
RTT101YJL047C PSD2P53037 1138 aaKnown RBP2.97□□□□□ -1.93
RTT101YJL047C YBL029C-AQ3E756 94 aa2.97□□□□□ -1.93
RTT101YJL047C GLC3P32775 704 aa2.97□□□□□ -1.93
RTT101YJL047C BDF1P35817 686 aa2.97□□□□□ -1.93
RTT101YJL047C DSF2P38213 736 aa2.97□□□□□ -1.93
RTT101YJL047C YNR021WP53723 404 aaKnown RBP2.96□□□□□ -1.93
RTT101YJL047C GUA1P38625 525 aaKnown RBP2.96□□□□□ -1.94
RTT101YJL047C EPS1P40557 701 aa2.96□□□□□ -1.94
RTT101YJL047C URN1Q06525 465 aaKnown RBP2.95□□□□□ -1.94
RTT101YJL047C MAM3Q12296 706 aa2.95□□□□□ -1.94
RTT101YJL047C GEF1P37020 779 aa2.95□□□□□ -1.94
RTT101YJL047C SUB2Q07478 446 aaKnown RBP2.95□□□□□ -1.94
RTT101YJL047C AI2P03876 854 aa2.94□□□□□ -1.94
RTT101YJL047C PBS2P08018 668 aa2.94□□□□□ -1.94
RTT101YJL047C SSA1P10591 642 aaKnown RBP2.94□□□□□ -1.94
RTT101YJL047C MRX12P47084 519 aa2.94□□□□□ -1.94
RTT101YJL047C AIM7Q12156 149 aa2.93□□□□□ -1.94
RTT101YJL047C AIR2Q12476 344 aaKnown RBP2.93□□□□□ -1.94
RTT101YJL047C RCR1P38212 213 aa2.92□□□□□ -1.94
RTT101YJL047C MST1P07236 462 aa2.91□□□□□ -1.94
RTT101YJL047C DIT2P21595 489 aa2.91□□□□□ -1.94
RTT101YJL047C IES2P40154 320 aa2.91□□□□□ -1.94
RTT101YJL047C HGH1P48362 394 aaKnown RBP2.91□□□□□ -1.94
RTT101YJL047C VNX1P42839 908 aa2.91□□□□□ -1.94
RTT101YJL047C NUP42P49686 430 aaKnown RBP2.91□□□□□ -1.94
RTT101YJL047C NOP7P53261 605 aaKnown RBP2.9□□□□□ -1.94
RTT101YJL047C TFB3Q03290 321 aa2.9□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms