Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 SEC16YPL085W 6588 nt2.04□□□□□ -2.08
CUZ1P53899 KRE33YNL132W 3171 nt2.03□□□□□ -2.08
CUZ1P53899 tD(GUC)QtD(GUC)Q 75 nt2.03□□□□□ -2.08
CUZ1P53899 EMC5YIL027C 426 nt2.03□□□□□ -2.08
CUZ1P53899 DNF1YER166W 4716 nt2.02□□□□□ -2.09
CUZ1P53899 YLR299C-AYLR299C-A 93 nt2.02□□□□□ -2.09
CUZ1P53899 BNI1YNL271C 5862 nt2.02□□□□□ -2.09
CUZ1P53899 ANS1YHR126C 480 nt2□□□□□ -2.09
CUZ1P53899 BEM3YPL115C 3387 nt1.99□□□□□ -2.09
CUZ1P53899 BPH1YCR032W 6504 nt1.99□□□□□ -2.09
CUZ1P53899 snR14snR14 160 nt1.99□□□□□ -2.09
CUZ1P53899 MGA2YIR033W 3342 nt1.99□□□□□ -2.09
CUZ1P53899 YDL159W-AYDL159W-A 132 nt1.98□□□□□ -2.09
CUZ1P53899 TFC3YAL001C 3483 nt1.98□□□□□ -2.09
CUZ1P53899 STH1YIL126W 4080 nt1.98□□□□□ -2.09
CUZ1P53899 UTP22YGR090W 3714 nt1.97□□□□□ -2.09
CUZ1P53899 HER1YOR227W 3741 nt1.96□□□□□ -2.1
CUZ1P53899 YLR419WYLR419W 4308 nt1.95□□□□□ -2.1
CUZ1P53899 YOL098CYOL098C 3114 nt1.95□□□□□ -2.1
CUZ1P53899 STO1YMR125W 2586 nt1.95□□□□□ -2.1
CUZ1P53899 BRE1YDL074C 2103 nt1.94□□□□□ -2.1
CUZ1P53899 TOR2YKL203C 7425 nt1.94□□□□□ -2.1
CUZ1P53899 SMC4YLR086W 4257 nt1.93□□□□□ -2.1
CUZ1P53899 YDL159C-BYDL159C-B 177 nt1.93□□□□□ -2.1
CUZ1P53899 RPL41AYDL184C 78 nt1.93□□□□□ -2.1
CUZ1P53899 YPR160W-AYPR160W-A 81 nt1.93□□□□□ -2.1
CUZ1P53899 GEA2YEL022W 4380 nt1.93□□□□□ -2.1
CUZ1P53899 MYO4YAL029C 4416 nt1.93□□□□□ -2.1
CUZ1P53899 YLR422WYLR422W 5799 nt1.92□□□□□ -2.1
CUZ1P53899 KAP122YGL016W 3246 nt1.91□□□□□ -2.1
CUZ1P53899 PRP16YKR086W 3216 nt1.91□□□□□ -2.1
CUZ1P53899 SKI7YOR076C 2244 nt1.91□□□□□ -2.1
CUZ1P53899 EST1YLR233C 2100 nt1.91□□□□□ -2.1
CUZ1P53899 SAC3YDR159W 3906 nt1.91□□□□□ -2.1
CUZ1P53899 YHR180C-BYHR180C-B 105 nt1.9□□□□□ -2.11
CUZ1P53899 UBR2YLR024C 5619 nt1.9□□□□□ -2.11
CUZ1P53899 PKH3YDR466W 2697 nt1.9□□□□□ -2.11
CUZ1P53899 PET127YOR017W 2403 nt1.88□□□□□ -2.11
CUZ1P53899 SIR4YDR227W 4077 nt1.87□□□□□ -2.11
CUZ1P53899 SEC8YPR055W 3198 nt1.87□□□□□ -2.11
CUZ1P53899 YML054C-AYML054C-A 159 nt1.87□□□□□ -2.11
CUZ1P53899 snR38snR38 95 nt1.87□□□□□ -2.11
CUZ1P53899 YBR296C-AYBR296C-A 120 nt1.87□□□□□ -2.11
CUZ1P53899 YHR214C-BYHR214C-B 5382 nt1.87□□□□□ -2.11
CUZ1P53899 snR69snR69 101 nt1.86□□□□□ -2.11
CUZ1P53899 tN(GUU)QtN(GUU)Q 71 nt1.86□□□□□ -2.11
CUZ1P53899 DGR1YNL130C-A 147 nt1.86□□□□□ -2.11
CUZ1P53899 AI1Q0050 2505 nt1.86□□□□□ -2.11
CUZ1P53899 YMR045CYMR045C 5268 nt1.84□□□□□ -2.11
CUZ1P53899 YGR122C-AYGR122C-A 129 nt1.84□□□□□ -2.11
CUZ1P53899 INO80YGL150C 4470 nt1.84□□□□□ -2.12
CUZ1P53899 ULP2YIL031W 3105 nt1.84□□□□□ -2.12
CUZ1P53899 YCS4YLR272C 3531 nt1.83□□□□□ -2.12
CUZ1P53899 SXM1YDR395W 2835 nt1.83□□□□□ -2.12
CUZ1P53899 YSP1YHR155W 3687 nt1.83□□□□□ -2.12
CUZ1P53899 REV3YPL167C 4515 nt1.83□□□□□ -2.12
CUZ1P53899 APL3YBL037W 3078 nt1.82□□□□□ -2.12
CUZ1P53899 CSF1YLR087C 8877 nt1.82□□□□□ -2.12
CUZ1P53899 YHR180W-AYHR180W-A 183 nt1.82□□□□□ -2.12
CUZ1P53899 RDS3YPR094W 324 nt1.82□□□□□ -2.12
CUZ1P53899 SKI3YPR189W 4299 nt1.82□□□□□ -2.12
CUZ1P53899 SPP41YDR464W 4308 nt1.82□□□□□ -2.12
CUZ1P53899 KCS1YDR017C 3153 nt1.81□□□□□ -2.12
CUZ1P53899 YLR399W-AYLR399W-A 105 nt1.81□□□□□ -2.12
CUZ1P53899 CSE1YGL238W 2883 nt1.81□□□□□ -2.12
CUZ1P53899 SEC3YER008C 4011 nt1.81□□□□□ -2.12
CUZ1P53899 CDC25YLR310C 4770 nt1.81□□□□□ -2.12
CUZ1P53899 NIP1YMR309C 2439 nt1.79□□□□□ -2.12
CUZ1P53899 FAB1YFR019W 6837 nt1.79□□□□□ -2.12
CUZ1P53899 FKS1YLR342W 5631 nt1.78□□□□□ -2.12
CUZ1P53899 IRC20YLR247C 4671 nt1.78□□□□□ -2.13
CUZ1P53899 USO1YDL058W 5373 nt1.76□□□□□ -2.13
CUZ1P53899 UBP2YOR124C 3819 nt1.76□□□□□ -2.13
CUZ1P53899 ATG9YDL149W 2994 nt1.74□□□□□ -2.13
CUZ1P53899 HUG1YML058W-A 207 nt1.73□□□□□ -2.13
CUZ1P53899 SEC31YDL195W 3822 nt1.73□□□□□ -2.13
CUZ1P53899 SWI4YER111C 3282 nt1.72□□□□□ -2.13
CUZ1P53899 MSH3YCR092C 3057 nt1.72□□□□□ -2.13
CUZ1P53899 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
CUZ1P53899 NEO1YIL048W 3456 nt1.71□□□□□ -2.14
CUZ1P53899 NST1YNL091W 3723 nt1.71□□□□□ -2.14
CUZ1P53899 MSN5YDR335W 3675 nt1.7□□□□□ -2.14
CUZ1P53899 MON2YNL297C 4911 nt1.69□□□□□ -2.14
CUZ1P53899 NUP145YGL092W 3954 nt1.68□□□□□ -2.14
CUZ1P53899 YPL060C-AYPL060C-A 3315 nt1.68□□□□□ -2.14
CUZ1P53899 YJL077W-AYJL077W-A 87 nt1.67□□□□□ -2.14
CUZ1P53899 YMR272W-BYMR272W-B 108 nt1.67□□□□□ -2.14
CUZ1P53899 PAU12YGR294W 363 nt1.66□□□□□ -2.14
CUZ1P53899 SIP4YJL089W 2490 nt1.65□□□□□ -2.15
CUZ1P53899 DNF3YMR162C 4971 nt1.65□□□□□ -2.15
CUZ1P53899 PMD1YER132C 5262 nt1.64□□□□□ -2.15
CUZ1P53899 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
CUZ1P53899 BUL2YML111W 2763 nt1.63□□□□□ -2.15
CUZ1P53899 TRM732YMR259C 4263 nt1.63□□□□□ -2.15
CUZ1P53899 PET111YMR257C 2403 nt1.62□□□□□ -2.15
CUZ1P53899 NUP188YML103C 4968 nt1.61□□□□□ -2.15
CUZ1P53899 PEP1YBL017C 4740 nt1.6□□□□□ -2.15
CUZ1P53899 tQ(UUG)QtQ(UUG)Q 76 nt1.6□□□□□ -2.15
CUZ1P53899 EST2YLR318W 2655 nt1.6□□□□□ -2.15
CUZ1P53899 FYV8YGR196C 2454 nt1.59□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms