Protein–RNA interactions for Protein: P48565

RIM21, pH-response regulator protein palH/RIM21, yeastyeast

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM21P48565 NEO1YIL048W 3456 nt2.07□□□□□ -2.08
RIM21P48565 snR45snR45 172 nt2.07□□□□□ -2.08
RIM21P48565 YLR419WYLR419W 4308 nt2.07□□□□□ -2.08
RIM21P48565 YMR045CYMR045C 5268 nt2.06□□□□□ -2.08
RIM21P48565 GEA2YEL022W 4380 nt2.06□□□□□ -2.08
RIM21P48565 RAD9YDR217C 3930 nt2.06□□□□□ -2.08
RIM21P48565 YBR072C-AYBR072C-A 162 nt2.06□□□□□ -2.08
RIM21P48565 REV3YPL167C 4515 nt2.05□□□□□ -2.08
RIM21P48565 UTP22YGR090W 3714 nt2.05□□□□□ -2.08
RIM21P48565 YBR200W-AYBR200W-A 165 nt2.05□□□□□ -2.08
RIM21P48565 SWI4YER111C 3282 nt2.04□□□□□ -2.08
RIM21P48565 SPP41YDR464W 4308 nt2.03□□□□□ -2.09
RIM21P48565 NUP145YGL092W 3954 nt2.02□□□□□ -2.09
RIM21P48565 MON2YNL297C 4911 nt2□□□□□ -2.09
RIM21P48565 YMR247W-AYMR247W-A 144 nt2□□□□□ -2.09
RIM21P48565 FKS1YLR342W 5631 nt2□□□□□ -2.09
RIM21P48565 BEM3YPL115C 3387 nt2□□□□□ -2.09
RIM21P48565 SEC8YPR055W 3198 nt2□□□□□ -2.09
RIM21P48565 SEC3YER008C 4011 nt1.99□□□□□ -2.09
RIM21P48565 ASE1YOR058C 2658 nt1.99□□□□□ -2.09
RIM21P48565 BRE1YDL074C 2103 nt1.98□□□□□ -2.09
RIM21P48565 BST1YFL025C 3090 nt1.98□□□□□ -2.09
RIM21P48565 PRP16YKR086W 3216 nt1.98□□□□□ -2.09
RIM21P48565 PKH3YDR466W 2697 nt1.96□□□□□ -2.1
RIM21P48565 snR62snR62 100 nt1.95□□□□□ -2.1
RIM21P48565 AZF1YOR113W 2745 nt1.93□□□□□ -2.1
RIM21P48565 YDL073WYDL073W 2955 nt1.92□□□□□ -2.1
RIM21P48565 FAB1YFR019W 6837 nt1.92□□□□□ -2.1
RIM21P48565 YLR399W-AYLR399W-A 105 nt1.91□□□□□ -2.1
RIM21P48565 YOL083C-AYOL083C-A 141 nt1.91□□□□□ -2.1
RIM21P48565 CLU1YMR012W 3834 nt1.89□□□□□ -2.11
RIM21P48565 PMD1YER132C 5262 nt1.89□□□□□ -2.11
RIM21P48565 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
RIM21P48565 tT(UGU)HtT(UGU)H 72 nt1.88□□□□□ -2.11
RIM21P48565 YBR196C-AYBR196C-A 150 nt1.88□□□□□ -2.11
RIM21P48565 NUP188YML103C 4968 nt1.88□□□□□ -2.11
RIM21P48565 YHR214C-BYHR214C-B 5382 nt1.87□□□□□ -2.11
RIM21P48565 YSP1YHR155W 3687 nt1.86□□□□□ -2.11
RIM21P48565 SAC3YDR159W 3906 nt1.86□□□□□ -2.11
RIM21P48565 EST2YLR318W 2655 nt1.86□□□□□ -2.11
RIM21P48565 YPR160W-AYPR160W-A 81 nt1.85□□□□□ -2.11
RIM21P48565 UBP3YER151C 2739 nt1.85□□□□□ -2.11
RIM21P48565 tN(GUU)QtN(GUU)Q 71 nt1.83□□□□□ -2.12
RIM21P48565 YBL071C-BYBL071C-B 99 nt1.83□□□□□ -2.12
RIM21P48565 TRM732YMR259C 4263 nt1.83□□□□□ -2.12
RIM21P48565 YBL100W-CYBL100W-C 120 nt1.82□□□□□ -2.12
RIM21P48565 SEC10YLR166C 2616 nt1.81□□□□□ -2.12
RIM21P48565 CFT1YDR301W 4074 nt1.81□□□□□ -2.12
RIM21P48565 GLG1YKR058W 1851 nt1.8□□□□□ -2.12
RIM21P48565 ANS1YHR126C 480 nt1.79□□□□□ -2.12
RIM21P48565 SXM1YDR395W 2835 nt1.79□□□□□ -2.12
RIM21P48565 ULP2YIL031W 3105 nt1.79□□□□□ -2.12
RIM21P48565 IRC20YLR247C 4671 nt1.78□□□□□ -2.12
RIM21P48565 YMR272W-BYMR272W-B 108 nt1.76□□□□□ -2.13
RIM21P48565 PEP1YBL017C 4740 nt1.75□□□□□ -2.13
RIM21P48565 NNF2YGR089W 2811 nt1.75□□□□□ -2.13
RIM21P48565 RPS26AYGL189C 360 nt1.75□□□□□ -2.13
RIM21P48565 YOL164W-AYOL164W-A 183 nt1.74□□□□□ -2.13
RIM21P48565 IRA1YBR140C 9279 nt1.74□□□□□ -2.13
RIM21P48565 MEC1YBR136W 7107 nt1.73□□□□□ -2.13
RIM21P48565 YDR034C-AYDR034C-A 177 nt1.73□□□□□ -2.13
RIM21P48565 CDC39YCR093W 6327 nt1.72□□□□□ -2.13
RIM21P48565 VPS15YBR097W 4365 nt1.72□□□□□ -2.13
RIM21P48565 PIK1YNL267W 3201 nt1.71□□□□□ -2.14
RIM21P48565 YGR240C-AYGR240C-A 201 nt1.68□□□□□ -2.14
RIM21P48565 YLR286W-AYLR286W-A 135 nt1.68□□□□□ -2.14
RIM21P48565 YOR093CYOR093C 4947 nt1.66□□□□□ -2.14
RIM21P48565 tD(GUC)QtD(GUC)Q 75 nt1.65□□□□□ -2.15
RIM21P48565 SSK2YNR031C 4740 nt1.64□□□□□ -2.15
RIM21P48565 MSH3YCR092C 3057 nt1.63□□□□□ -2.15
RIM21P48565 BRR2YER172C 6492 nt1.6□□□□□ -2.15
RIM21P48565 HUG1YML058W-A 207 nt1.6□□□□□ -2.15
RIM21P48565 DNF3YMR162C 4971 nt1.6□□□□□ -2.15
RIM21P48565 NUP192YJL039C 5052 nt1.58□□□□□ -2.16
RIM21P48565 EST1YLR233C 2100 nt1.58□□□□□ -2.16
RIM21P48565 CSE1YGL238W 2883 nt1.57□□□□□ -2.16
RIM21P48565 YLL006W-AYLL006W-A 177 nt1.57□□□□□ -2.16
RIM21P48565 snR47snR47 99 nt1.57□□□□□ -2.16
RIM21P48565 YGR130CYGR130C 2451 nt1.56□□□□□ -2.16
RIM21P48565 snR69snR69 101 nt1.56□□□□□ -2.16
RIM21P48565 YLR299C-AYLR299C-A 93 nt1.55□□□□□ -2.16
RIM21P48565 FIG2YCR089W 4830 nt1.55□□□□□ -2.16
RIM21P48565 PET127YOR017W 2403 nt1.54□□□□□ -2.16
RIM21P48565 SPT7YBR081C 3999 nt1.54□□□□□ -2.16
RIM21P48565 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
RIM21P48565 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
RIM21P48565 YDL159C-BYDL159C-B 177 nt1.51□□□□□ -2.17
RIM21P48565 RDS3YPR094W 324 nt1.5□□□□□ -2.17
RIM21P48565 YJL077W-AYJL077W-A 87 nt1.48□□□□□ -2.17
RIM21P48565 CAT8YMR280C 4302 nt1.47□□□□□ -2.17
RIM21P48565 SIP4YJL089W 2490 nt1.46□□□□□ -2.18
RIM21P48565 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
RIM21P48565 NIP1YMR309C 2439 nt1.46□□□□□ -2.18
RIM21P48565 ORC3YLL004W 1851 nt1.45□□□□□ -2.18
RIM21P48565 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
RIM21P48565 BUL2YML111W 2763 nt1.43□□□□□ -2.18
RIM21P48565 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
RIM21P48565 NST1YNL091W 3723 nt1.4□□□□□ -2.19
RIM21P48565 YPL060C-AYPL060C-A 3315 nt1.39□□□□□ -2.19
RIM21P48565 PAU12YGR294W 363 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms