Protein–RNA interactions for Protein: P48562

CLA4, Serine/threonine-protein kinase CLA4, yeastyeast

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLA4P48562 PSD2YGR170W 3417 nt2.38□□□□□ -2.03
CLA4P48562 DNF1YER166W 4716 nt2.37□□□□□ -2.03
CLA4P48562 YDL159C-BYDL159C-B 177 nt2.37□□□□□ -2.03
CLA4P48562 TRL1YJL087C 2484 nt2.37□□□□□ -2.03
CLA4P48562 SPF1YEL031W 3648 nt2.37□□□□□ -2.03
CLA4P48562 AI1Q0050 2505 nt2.36□□□□□ -2.03
CLA4P48562 FAR11YNL127W 2862 nt2.35□□□□□ -2.03
CLA4P48562 NUT1YGL151W 3399 nt2.33□□□□□ -2.04
CLA4P48562 TDA9YML081W 3756 nt2.33□□□□□ -2.04
CLA4P48562 YAR009CYAR009C 3591 nt2.33□□□□□ -2.04
CLA4P48562 UTP22YGR090W 3714 nt2.32□□□□□ -2.04
CLA4P48562 snR38snR38 95 nt2.32□□□□□ -2.04
CLA4P48562 YML054C-AYML054C-A 159 nt2.31□□□□□ -2.04
CLA4P48562 NIP1YMR309C 2439 nt2.31□□□□□ -2.04
CLA4P48562 RTT101YJL047C 2529 nt2.31□□□□□ -2.04
CLA4P48562 INO80YGL150C 4470 nt2.3□□□□□ -2.04
CLA4P48562 YJL052C-AYJL052C-A 120 nt2.3□□□□□ -2.04
CLA4P48562 HSL1YKL101W 4557 nt2.29□□□□□ -2.04
CLA4P48562 FAB1YFR019W 6837 nt2.27□□□□□ -2.05
CLA4P48562 PET127YOR017W 2403 nt2.27□□□□□ -2.05
CLA4P48562 CCH1YGR217W 6120 nt2.26□□□□□ -2.05
CLA4P48562 SAC3YDR159W 3906 nt2.26□□□□□ -2.05
CLA4P48562 UTP21YLR409C 2820 nt2.26□□□□□ -2.05
CLA4P48562 EST1YLR233C 2100 nt2.26□□□□□ -2.05
CLA4P48562 PET111YMR257C 2403 nt2.25□□□□□ -2.05
CLA4P48562 YPR160W-AYPR160W-A 81 nt2.24□□□□□ -2.05
CLA4P48562 YOL098CYOL098C 3114 nt2.24□□□□□ -2.05
CLA4P48562 MSH6YDR097C 3729 nt2.23□□□□□ -2.05
CLA4P48562 DGR1YNL130C-A 147 nt2.23□□□□□ -2.05
CLA4P48562 UBR1YGR184C 5853 nt2.23□□□□□ -2.05
CLA4P48562 NUP192YJL039C 5052 nt2.23□□□□□ -2.05
CLA4P48562 PEP1YBL017C 4740 nt2.23□□□□□ -2.05
CLA4P48562 SEC31YDL195W 3822 nt2.22□□□□□ -2.05
CLA4P48562 snR69snR69 101 nt2.22□□□□□ -2.05
CLA4P48562 RDS3YPR094W 324 nt2.22□□□□□ -2.05
CLA4P48562 SEC16YPL085W 6588 nt2.22□□□□□ -2.05
CLA4P48562 RAD50YNL250W 3939 nt2.22□□□□□ -2.05
CLA4P48562 RAV1YJR033C 4074 nt2.21□□□□□ -2.06
CLA4P48562 KOG1YHR186C 4674 nt2.21□□□□□ -2.06
CLA4P48562 PAU12YGR294W 363 nt2.21□□□□□ -2.06
CLA4P48562 PAU24YBR301W 363 nt2.21□□□□□ -2.06
CLA4P48562 CSF1YLR087C 8877 nt2.21□□□□□ -2.06
CLA4P48562 SSK2YNR031C 4740 nt2.2□□□□□ -2.06
CLA4P48562 CDC25YLR310C 4770 nt2.2□□□□□ -2.06
CLA4P48562 IRA2YOL081W 9240 nt2.2□□□□□ -2.06
CLA4P48562 YOR343W-BYOR343W-B 5313 nt2.19□□□□□ -2.06
CLA4P48562 PRP16YKR086W 3216 nt2.19□□□□□ -2.06
CLA4P48562 ULP2YIL031W 3105 nt2.19□□□□□ -2.06
CLA4P48562 YLR422WYLR422W 5799 nt2.18□□□□□ -2.06
CLA4P48562 YHR180W-AYHR180W-A 183 nt2.18□□□□□ -2.06
CLA4P48562 EMC5YIL027C 426 nt2.18□□□□□ -2.06
CLA4P48562 BNI1YNL271C 5862 nt2.18□□□□□ -2.06
CLA4P48562 CHC1YGL206C 4962 nt2.17□□□□□ -2.06
CLA4P48562 HIR3YJR140C 4947 nt2.16□□□□□ -2.06
CLA4P48562 CAT8YMR280C 4302 nt2.16□□□□□ -2.06
CLA4P48562 YSP1YHR155W 3687 nt2.15□□□□□ -2.07
CLA4P48562 SEC8YPR055W 3198 nt2.14□□□□□ -2.07
CLA4P48562 PKH3YDR466W 2697 nt2.14□□□□□ -2.07
CLA4P48562 SPP41YDR464W 4308 nt2.13□□□□□ -2.07
CLA4P48562 CSE1YGL238W 2883 nt2.12□□□□□ -2.07
CLA4P48562 TOR1YJR066W 7413 nt2.12□□□□□ -2.07
CLA4P48562 NST1YNL091W 3723 nt2.09□□□□□ -2.07
CLA4P48562 snR14snR14 160 nt2.09□□□□□ -2.07
CLA4P48562 EST2YLR318W 2655 nt2.09□□□□□ -2.08
CLA4P48562 YJL077W-AYJL077W-A 87 nt2.08□□□□□ -2.08
CLA4P48562 YLR399W-AYLR399W-A 105 nt2.08□□□□□ -2.08
CLA4P48562 PMD1YER132C 5262 nt2.08□□□□□ -2.08
CLA4P48562 MSN5YDR335W 3675 nt2.07□□□□□ -2.08
CLA4P48562 STO1YMR125W 2586 nt2.07□□□□□ -2.08
CLA4P48562 HER1YOR227W 3741 nt2.06□□□□□ -2.08
CLA4P48562 YCS4YLR272C 3531 nt2.06□□□□□ -2.08
CLA4P48562 GEA2YEL022W 4380 nt2.05□□□□□ -2.08
CLA4P48562 UBP2YOR124C 3819 nt2.04□□□□□ -2.08
CLA4P48562 APL3YBL037W 3078 nt2.04□□□□□ -2.08
CLA4P48562 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
CLA4P48562 NEO1YIL048W 3456 nt2.03□□□□□ -2.08
CLA4P48562 tN(GUU)QtN(GUU)Q 71 nt2.02□□□□□ -2.09
CLA4P48562 KAP122YGL016W 3246 nt2□□□□□ -2.09
CLA4P48562 SIP4YJL089W 2490 nt2□□□□□ -2.09
CLA4P48562 YOR376W-AYOR376W-A 156 nt1.99□□□□□ -2.09
CLA4P48562 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
CLA4P48562 SEC3YER008C 4011 nt1.99□□□□□ -2.09
CLA4P48562 USO1YDL058W 5373 nt1.99□□□□□ -2.09
CLA4P48562 YMR272W-BYMR272W-B 108 nt1.98□□□□□ -2.09
CLA4P48562 SMC4YLR086W 4257 nt1.98□□□□□ -2.09
CLA4P48562 MSH3YCR092C 3057 nt1.97□□□□□ -2.09
CLA4P48562 YOR093CYOR093C 4947 nt1.96□□□□□ -2.1
CLA4P48562 DNF3YMR162C 4971 nt1.96□□□□□ -2.1
CLA4P48562 tQ(UUG)QtQ(UUG)Q 76 nt1.95□□□□□ -2.1
CLA4P48562 BUL2YML111W 2763 nt1.95□□□□□ -2.1
CLA4P48562 FYV8YGR196C 2454 nt1.95□□□□□ -2.1
CLA4P48562 YPL060C-AYPL060C-A 3315 nt1.94□□□□□ -2.1
CLA4P48562 KCS1YDR017C 3153 nt1.94□□□□□ -2.1
CLA4P48562 MLP2YIL149C 5040 nt1.93□□□□□ -2.1
CLA4P48562 YGR130CYGR130C 2451 nt1.92□□□□□ -2.1
CLA4P48562 FIG2YCR089W 4830 nt1.91□□□□□ -2.1
CLA4P48562 SKI3YPR189W 4299 nt1.9□□□□□ -2.11
CLA4P48562 CLU1YMR012W 3834 nt1.9□□□□□ -2.11
CLA4P48562 YDL114W-AYDL114W-A 114 nt1.88□□□□□ -2.11
CLA4P48562 NUP145YGL092W 3954 nt1.85□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms