Protein–RNA interactions for Protein: P37292

SHM1, Serine hydroxymethyltransferase, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM1P37292 snR53snR53 91 nt2.08□□□□□ -2.08
SHM1P37292 SAC3YDR159W 3906 nt2.08□□□□□ -2.08
SHM1P37292 RAD9YDR217C 3930 nt2.08□□□□□ -2.08
SHM1P37292 TOR2YKL203C 7425 nt2.07□□□□□ -2.08
SHM1P37292 NUP170YBL079W 4509 nt2.06□□□□□ -2.08
SHM1P37292 ATG9YDL149W 2994 nt2.04□□□□□ -2.08
SHM1P37292 BEM3YPL115C 3387 nt2.03□□□□□ -2.08
SHM1P37292 SMC4YLR086W 4257 nt2.02□□□□□ -2.09
SHM1P37292 SEC10YLR166C 2616 nt2.02□□□□□ -2.09
SHM1P37292 YBR200W-AYBR200W-A 165 nt2.02□□□□□ -2.09
SHM1P37292 snR47snR47 99 nt2.02□□□□□ -2.09
SHM1P37292 snR14snR14 160 nt2.01□□□□□ -2.09
SHM1P37292 STO1YMR125W 2586 nt2.01□□□□□ -2.09
SHM1P37292 WAR1YML076C 2835 nt2□□□□□ -2.09
SHM1P37292 YMR272W-BYMR272W-B 108 nt2□□□□□ -2.09
SHM1P37292 YLR422WYLR422W 5799 nt2□□□□□ -2.09
SHM1P37292 YDR371C-AYDR371C-A 105 nt1.98□□□□□ -2.09
SHM1P37292 UBR2YLR024C 5619 nt1.98□□□□□ -2.09
SHM1P37292 APL3YBL037W 3078 nt1.97□□□□□ -2.09
SHM1P37292 YDL073WYDL073W 2955 nt1.96□□□□□ -2.1
SHM1P37292 snR64snR64 101 nt1.96□□□□□ -2.1
SHM1P37292 PEP1YBL017C 4740 nt1.96□□□□□ -2.1
SHM1P37292 PRP16YKR086W 3216 nt1.96□□□□□ -2.1
SHM1P37292 GEA2YEL022W 4380 nt1.96□□□□□ -2.1
SHM1P37292 USO1YDL058W 5373 nt1.95□□□□□ -2.1
SHM1P37292 YLR286W-AYLR286W-A 135 nt1.95□□□□□ -2.1
SHM1P37292 FKS1YLR342W 5631 nt1.94□□□□□ -2.1
SHM1P37292 UBP3YER151C 2739 nt1.94□□□□□ -2.1
SHM1P37292 SKI3YPR189W 4299 nt1.94□□□□□ -2.1
SHM1P37292 KAP122YGL016W 3246 nt1.93□□□□□ -2.1
SHM1P37292 CDC25YLR310C 4770 nt1.93□□□□□ -2.1
SHM1P37292 GLG1YKR058W 1851 nt1.93□□□□□ -2.1
SHM1P37292 snR50snR50 90 nt1.93□□□□□ -2.1
SHM1P37292 IRC20YLR247C 4671 nt1.93□□□□□ -2.1
SHM1P37292 BPH1YCR032W 6504 nt1.92□□□□□ -2.1
SHM1P37292 AZF1YOR113W 2745 nt1.92□□□□□ -2.1
SHM1P37292 YCS4YLR272C 3531 nt1.91□□□□□ -2.1
SHM1P37292 SEC8YPR055W 3198 nt1.91□□□□□ -2.1
SHM1P37292 ORC3YLL004W 1851 nt1.9□□□□□ -2.11
SHM1P37292 ASE1YOR058C 2658 nt1.89□□□□□ -2.11
SHM1P37292 PIK1YNL267W 3201 nt1.88□□□□□ -2.11
SHM1P37292 ANS1YHR126C 480 nt1.87□□□□□ -2.11
SHM1P37292 NNF2YGR089W 2811 nt1.87□□□□□ -2.11
SHM1P37292 DNF3YMR162C 4971 nt1.87□□□□□ -2.11
SHM1P37292 tD(GUC)QtD(GUC)Q 75 nt1.86□□□□□ -2.11
SHM1P37292 KCS1YDR017C 3153 nt1.86□□□□□ -2.11
SHM1P37292 TMA7YLR262C-A 195 nt1.85□□□□□ -2.11
SHM1P37292 CFT1YDR301W 4074 nt1.84□□□□□ -2.11
SHM1P37292 YLR399W-AYLR399W-A 105 nt1.84□□□□□ -2.11
SHM1P37292 YMR045CYMR045C 5268 nt1.84□□□□□ -2.12
SHM1P37292 YSP1YHR155W 3687 nt1.84□□□□□ -2.12
SHM1P37292 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
SHM1P37292 YLR299C-AYLR299C-A 93 nt1.83□□□□□ -2.12
SHM1P37292 MSN5YDR335W 3675 nt1.81□□□□□ -2.12
SHM1P37292 SEC3YER008C 4011 nt1.81□□□□□ -2.12
SHM1P37292 SWI4YER111C 3282 nt1.81□□□□□ -2.12
SHM1P37292 YBR109W-AYBR109W-A 225 nt1.81□□□□□ -2.12
SHM1P37292 YLR419WYLR419W 4308 nt1.81□□□□□ -2.12
SHM1P37292 NUP145YGL092W 3954 nt1.8□□□□□ -2.12
SHM1P37292 YPR160W-AYPR160W-A 81 nt1.8□□□□□ -2.12
SHM1P37292 FAB1YFR019W 6837 nt1.8□□□□□ -2.12
SHM1P37292 BRR2YER172C 6492 nt1.8□□□□□ -2.12
SHM1P37292 ULP2YIL031W 3105 nt1.79□□□□□ -2.12
SHM1P37292 SXM1YDR395W 2835 nt1.79□□□□□ -2.12
SHM1P37292 tN(GUU)QtN(GUU)Q 71 nt1.78□□□□□ -2.12
SHM1P37292 YKL225WYKL225W 348 nt1.77□□□□□ -2.13
SHM1P37292 YDL159C-BYDL159C-B 177 nt1.75□□□□□ -2.13
SHM1P37292 EST1YLR233C 2100 nt1.73□□□□□ -2.13
SHM1P37292 PKH3YDR466W 2697 nt1.73□□□□□ -2.13
SHM1P37292 MON2YNL297C 4911 nt1.71□□□□□ -2.14
SHM1P37292 snR69snR69 101 nt1.71□□□□□ -2.14
SHM1P37292 BST1YFL025C 3090 nt1.7□□□□□ -2.14
SHM1P37292 YHR180C-BYHR180C-B 105 nt1.69□□□□□ -2.14
SHM1P37292 HUG1YML058W-A 207 nt1.69□□□□□ -2.14
SHM1P37292 RDS3YPR094W 324 nt1.69□□□□□ -2.14
SHM1P37292 CSE1YGL238W 2883 nt1.68□□□□□ -2.14
SHM1P37292 YNL284C-BYNL284C-B 5268 nt1.68□□□□□ -2.14
SHM1P37292 RPL41AYDL184C 78 nt1.67□□□□□ -2.14
SHM1P37292 tT(UGU)HtT(UGU)H 72 nt1.67□□□□□ -2.14
SHM1P37292 PET127YOR017W 2403 nt1.67□□□□□ -2.14
SHM1P37292 YMR247W-AYMR247W-A 144 nt1.66□□□□□ -2.14
SHM1P37292 MSH3YCR092C 3057 nt1.66□□□□□ -2.14
SHM1P37292 NUP188YML103C 4968 nt1.65□□□□□ -2.14
SHM1P37292 tQ(UUG)E2tQ(UUG)E2 72 nt1.65□□□□□ -2.15
SHM1P37292 PMD1YER132C 5262 nt1.65□□□□□ -2.15
SHM1P37292 HKR1YDR420W 5409 nt1.64□□□□□ -2.15
SHM1P37292 CLU1YMR012W 3834 nt1.62□□□□□ -2.15
SHM1P37292 YJL077W-AYJL077W-A 87 nt1.61□□□□□ -2.15
SHM1P37292 BUD3YCL014W 4911 nt1.6□□□□□ -2.15
SHM1P37292 YML054C-AYML054C-A 159 nt1.6□□□□□ -2.15
SHM1P37292 YBR296C-AYBR296C-A 120 nt1.6□□□□□ -2.15
SHM1P37292 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
SHM1P37292 CAT8YMR280C 4302 nt1.6□□□□□ -2.15
SHM1P37292 EST2YLR318W 2655 nt1.6□□□□□ -2.15
SHM1P37292 YKL096C-BYKL096C-B 150 nt1.59□□□□□ -2.15
SHM1P37292 SIP4YJL089W 2490 nt1.58□□□□□ -2.16
SHM1P37292 YLL006W-AYLL006W-A 177 nt1.57□□□□□ -2.16
SHM1P37292 TRM732YMR259C 4263 nt1.57□□□□□ -2.16
SHM1P37292 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
SHM1P37292 YLR149C-AYLR149C-A 87 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms