Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.89■□□□□ 0.45
SOX6P35712 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.89■□□□□ 0.45
SOX6P35712 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SOX6P35712 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SOX6P35712 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.89■□□□□ 0.45
SOX6P35712 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 AC007613.1-201ENST00000572811 2597 ntBASIC17.89■□□□□ 0.45
SOX6P35712 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 OR6D1P-202ENST00000641007 5290 ntBASIC17.89■□□□□ 0.45
SOX6P35712 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SOX6P35712 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.89■□□□□ 0.45
SOX6P35712 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX6P35712 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 AC079598.2-202ENST00000546624 1451 ntBASIC17.88■□□□□ 0.45
SOX6P35712 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SOX6P35712 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SOX6P35712 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.88■□□□□ 0.45
SOX6P35712 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SOX6P35712 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.88■□□□□ 0.45
SOX6P35712 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX6P35712 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.88■□□□□ 0.45
SOX6P35712 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX6P35712 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 HTR7P1-202ENST00000624664 4411 ntBASIC17.88■□□□□ 0.45
SOX6P35712 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.88■□□□□ 0.45
SOX6P35712 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SOX6P35712 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SOX6P35712 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX6P35712 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 TREX1-205ENST00000625293 1783 ntBASIC17.87■□□□□ 0.45
SOX6P35712 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX6P35712 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX6P35712 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
SOX6P35712 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SOX6P35712 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SOX6P35712 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 PKD1P1-201ENST00000458669 6805 ntBASIC17.86■□□□□ 0.45
SOX6P35712 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.86■□□□□ 0.45
SOX6P35712 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SOX6P35712 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
SOX6P35712 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SOX6P35712 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SOX6P35712 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms