Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.9■□□□□ 0.3
COL8A2P25067 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.9■□□□□ 0.3
COL8A2P25067 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.9■□□□□ 0.3
COL8A2P25067 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL8A2P25067 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL8A2P25067 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL8A2P25067 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL8A2P25067 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.89■□□□□ 0.3
COL8A2P25067 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
COL8A2P25067 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
COL8A2P25067 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL8A2P25067 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
COL8A2P25067 AC124283.5-201ENST00000624661 1809 ntBASIC16.89■□□□□ 0.29
COL8A2P25067 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL8A2P25067 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.89■□□□□ 0.29
COL8A2P25067 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL8A2P25067 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
COL8A2P25067 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL8A2P25067 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.89■□□□□ 0.29
COL8A2P25067 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL8A2P25067 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COL8A2P25067 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COL8A2P25067 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COL8A2P25067 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.89■□□□□ 0.29
COL8A2P25067 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL8A2P25067 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
COL8A2P25067 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
COL8A2P25067 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 PTBP1P-201ENST00000554374 1601 ntBASIC16.88■□□□□ 0.29
COL8A2P25067 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL8A2P25067 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL8A2P25067 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.88■□□□□ 0.29
COL8A2P25067 AL596275.1-201ENST00000423464 877 ntBASIC16.88■□□□□ 0.29
COL8A2P25067 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COL8A2P25067 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.88■□□□□ 0.29
COL8A2P25067 AC124016.1-201ENST00000609552 612 ntBASIC16.88■□□□□ 0.29
COL8A2P25067 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.88■□□□□ 0.29
COL8A2P25067 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.88■□□□□ 0.29
COL8A2P25067 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.88■□□□□ 0.29
COL8A2P25067 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL8A2P25067 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.87■□□□□ 0.29
COL8A2P25067 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 KRASP1-201ENST00000407852 552 ntBASIC16.87■□□□□ 0.29
COL8A2P25067 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.87■□□□□ 0.29
COL8A2P25067 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.87■□□□□ 0.29
COL8A2P25067 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COL8A2P25067 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL8A2P25067 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.87■□□□□ 0.29
COL8A2P25067 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.86■□□□□ 0.29
COL8A2P25067 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms