Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
GMDSO60547 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.62■□□□□ 0.41
GMDSO60547 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.62■□□□□ 0.41
GMDSO60547 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.62■□□□□ 0.41
GMDSO60547 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.62■□□□□ 0.41
GMDSO60547 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GMDSO60547 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.62■□□□□ 0.41
GMDSO60547 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.62■□□□□ 0.41
GMDSO60547 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
GMDSO60547 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GMDSO60547 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
GMDSO60547 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
GMDSO60547 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 AC004408.2-201ENST00000623613 2777 ntBASIC17.61■□□□□ 0.41
GMDSO60547 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 AC091799.1-201ENST00000422823 811 ntBASIC17.61■□□□□ 0.41
GMDSO60547 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.61■□□□□ 0.41
GMDSO60547 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
GMDSO60547 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
GMDSO60547 BID-214ENST00000617586 542 ntTSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 AC013268.1-206ENST00000638368 961 ntBASIC17.61■□□□□ 0.41
GMDSO60547 AC112229.1-201ENST00000639295 961 ntBASIC17.61■□□□□ 0.41
GMDSO60547 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.61■□□□□ 0.41
GMDSO60547 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GMDSO60547 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.61■□□□□ 0.41
GMDSO60547 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.6■□□□□ 0.41
GMDSO60547 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 CDV3P1-201ENST00000471403 739 ntBASIC17.6■□□□□ 0.41
GMDSO60547 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.6■□□□□ 0.41
GMDSO60547 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.6■□□□□ 0.41
GMDSO60547 MFSD11-216ENST00000590393 1141 ntBASIC17.6■□□□□ 0.41
GMDSO60547 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GMDSO60547 AC011767.1-201ENST00000617410 1153 ntBASIC17.6■□□□□ 0.41
GMDSO60547 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
GMDSO60547 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.6■□□□□ 0.41
GMDSO60547 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
GMDSO60547 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.6■□□□□ 0.41
GMDSO60547 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.6■□□□□ 0.41
GMDSO60547 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GMDSO60547 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GMDSO60547 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.59■□□□□ 0.41
GMDSO60547 TCF3P1-201ENST00000423021 1937 ntBASIC17.59■□□□□ 0.41
GMDSO60547 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms