Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.85■■□□□ 1.57
SRGAP3O43295 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SRGAP3O43295 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SRGAP3O43295 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
SRGAP3O43295 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.85■■□□□ 1.57
SRGAP3O43295 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.85■■□□□ 1.57
SRGAP3O43295 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.85■■□□□ 1.57
SRGAP3O43295 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.85■■□□□ 1.57
SRGAP3O43295 AC073648.6-201ENST00000641589 218 ntBASIC24.85■■□□□ 1.57
SRGAP3O43295 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SRGAP3O43295 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.85■■□□□ 1.57
SRGAP3O43295 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SRGAP3O43295 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.84■■□□□ 1.57
SRGAP3O43295 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SRGAP3O43295 AC128676.1-201ENST00000454392 318 ntBASIC24.84■■□□□ 1.57
SRGAP3O43295 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 RPS2P52-201ENST00000469610 820 ntBASIC24.84■■□□□ 1.57
SRGAP3O43295 ITM2C-210ENST00000620962 501 ntBASIC24.84■■□□□ 1.57
SRGAP3O43295 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.84■■□□□ 1.57
SRGAP3O43295 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.84■■□□□ 1.57
SRGAP3O43295 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.84■■□□□ 1.57
SRGAP3O43295 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
SRGAP3O43295 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SRGAP3O43295 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
SRGAP3O43295 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
SRGAP3O43295 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
SRGAP3O43295 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 AC099778.1-201ENST00000568593 1911 ntBASIC24.83■■□□□ 1.57
SRGAP3O43295 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SRGAP3O43295 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.83■■□□□ 1.57
SRGAP3O43295 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.83■■□□□ 1.57
SRGAP3O43295 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SRGAP3O43295 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.83■■□□□ 1.57
SRGAP3O43295 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.83■■□□□ 1.57
SRGAP3O43295 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.83■■□□□ 1.57
SRGAP3O43295 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
SRGAP3O43295 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SRGAP3O43295 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.56
SRGAP3O43295 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.83■■□□□ 1.56
SRGAP3O43295 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SRGAP3O43295 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SRGAP3O43295 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
SRGAP3O43295 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
SRGAP3O43295 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 KRT17P3-201ENST00000420566 1262 ntBASIC24.82■■□□□ 1.56
SRGAP3O43295 KRT16P6-202ENST00000425692 1426 ntBASIC24.82■■□□□ 1.56
SRGAP3O43295 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.82■■□□□ 1.56
SRGAP3O43295 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.82■■□□□ 1.56
SRGAP3O43295 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
SRGAP3O43295 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 AC069544.1-201ENST00000609399 999 ntBASIC24.82■■□□□ 1.56
SRGAP3O43295 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SRGAP3O43295 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.82■■□□□ 1.56
SRGAP3O43295 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.81■■□□□ 1.56
SRGAP3O43295 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.81■■□□□ 1.56
SRGAP3O43295 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.81■■□□□ 1.56
SRGAP3O43295 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.81■■□□□ 1.56
SRGAP3O43295 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 KRT18P29-201ENST00000397031 1267 ntBASIC24.81■■□□□ 1.56
SRGAP3O43295 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.81■■□□□ 1.56
SRGAP3O43295 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.81■■□□□ 1.56
SRGAP3O43295 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
SRGAP3O43295 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SRGAP3O43295 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.81■■□□□ 1.56
SRGAP3O43295 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRGAP3O43295 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
SRGAP3O43295 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.8■■□□□ 1.56
SRGAP3O43295 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.8■■□□□ 1.56
SRGAP3O43295 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
SRGAP3O43295 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRGAP3O43295 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SRGAP3O43295 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms