Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.34□□□□□ -0.27
RTL8CO15255 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
RTL8CO15255 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.34□□□□□ -0.27
RTL8CO15255 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.34□□□□□ -0.27
RTL8CO15255 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.34□□□□□ -0.27
RTL8CO15255 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.34□□□□□ -0.27
RTL8CO15255 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.34□□□□□ -0.27
RTL8CO15255 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.34□□□□□ -0.27
RTL8CO15255 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
RTL8CO15255 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RTL8CO15255 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RTL8CO15255 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.33□□□□□ -0.28
RTL8CO15255 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.33□□□□□ -0.28
RTL8CO15255 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.33□□□□□ -0.28
RTL8CO15255 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.33□□□□□ -0.28
RTL8CO15255 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.33□□□□□ -0.28
RTL8CO15255 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.33□□□□□ -0.28
RTL8CO15255 AC087388.1-201ENST00000571370 1112 ntBASIC13.33□□□□□ -0.28
RTL8CO15255 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.33□□□□□ -0.28
RTL8CO15255 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RTL8CO15255 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.33□□□□□ -0.28
RTL8CO15255 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RTL8CO15255 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RTL8CO15255 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.33□□□□□ -0.28
RTL8CO15255 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
RTL8CO15255 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 NIFKP9-201ENST00000419265 221 ntBASIC13.32□□□□□ -0.28
RTL8CO15255 KSR1P1-201ENST00000446298 240 ntBASIC13.32□□□□□ -0.28
RTL8CO15255 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RTL8CO15255 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.32□□□□□ -0.28
RTL8CO15255 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.32□□□□□ -0.28
RTL8CO15255 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RTL8CO15255 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTL8CO15255 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RTL8CO15255 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 AC012676.1-201ENST00000574705 1949 ntBASIC13.31□□□□□ -0.28
RTL8CO15255 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.31□□□□□ -0.28
RTL8CO15255 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.31□□□□□ -0.28
RTL8CO15255 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL8CO15255 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL8CO15255 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL8CO15255 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL8CO15255 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RTL8CO15255 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL8CO15255 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.31□□□□□ -0.28
RTL8CO15255 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
RTL8CO15255 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.31□□□□□ -0.28
RTL8CO15255 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTL8CO15255 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms