Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 YBX1P4-201ENST00000392794 808 ntBASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 LINC01465-201ENST00000408887 1940 ntBASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-2A0A0B4J235 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 TREX1-205ENST00000625293 1783 ntBASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-2A0A0B4J235 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 AC092028.1-203ENST00000608262 953 ntBASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms