Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV19A0A0A6YYK7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 DPP3P2-201ENST00000416030 1696 ntBASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV19A0A0A6YYK7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 AL353807.1-201ENST00000427475 662 ntBASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRAV19A0A0A6YYK7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 AF186192.3-201ENST00000583427 947 ntBASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV19A0A0A6YYK7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 AC092720.2-201ENST00000602388 1665 ntBASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV19A0A0A6YYK7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRAV19A0A0A6YYK7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 BX088651.1-201ENST00000540551 451 ntBASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 REXO1L12P-201ENST00000622156 912 ntBASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV19A0A0A6YYK7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV19A0A0A6YYK7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRAV19A0A0A6YYK7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV19A0A0A6YYK7 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.69■□□□□ 0.9
TRAV19A0A0A6YYK7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms