Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ERGIC3-208ENST00000442139 472 ntTSL 310.52□□□□□ -0.732e-7■□□□□ 11
PRPF8Q6P2Q9 ERGIC3-210ENST00000451605 520 ntTSL 28.25□□□□□ -1.092e-7■□□□□ 11
PRPF8Q6P2Q9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.492e-6■□□□□ 11
PRPF8Q6P2Q9 RELL1-202ENST00000454158 1350 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.942e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.56■■□□□ 1.22e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.75■□□□□ 0.912e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.79■□□□□ 0.762e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-210ENST00000485789 997 ntTSL 219.79■□□□□ 0.762e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.522e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.392e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-214ENST00000587337 563 ntTSL 417.14■□□□□ 0.332e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.3□□□□□ -0.122e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-211ENST00000491638 1041 ntTSL 212.18□□□□□ -0.462e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.722e-6■□□□□ 11
PRPF8Q6P2Q9 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.762e-6■□□□□ 11
PRPF8Q6P2Q9 SLC6A8-210ENST00000485324 2401 ntTSL 215.54■□□□□ 0.082e-16■□□□□ 11
PRPF8Q6P2Q9 SLC6A8-202ENST00000413787 468 ntTSL 515.46■□□□□ 0.074e-7■□□□□ 11
PRPF8Q6P2Q9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.48■□□□□ 0.079e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.78□□□□□ -0.29e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC11.76□□□□□ -0.539e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-204ENST00000579383 731 ntTSL 211.42□□□□□ -0.589e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.05□□□□□ -0.649e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC10.51□□□□□ -0.739e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC9.75□□□□□ -0.859e-8■□□□□ 11
PRPF8Q6P2Q9 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC9.22□□□□□ -0.939e-8■□□□□ 11
PRPF8Q6P2Q9 CRNDE-204ENST00000558031 464 ntTSL 22.14□□□□□ -2.071e-7■□□□□ 11
PRPF8Q6P2Q9 CRNDE-208ENST00000560029 659 ntTSL 21.6□□□□□ -2.151e-7■□□□□ 11
PRPF8Q6P2Q9 ABR-215ENST00000571945 760 ntTSL 421.49■■□□□ 1.035e-7■□□□□ 11
PRPF8Q6P2Q9 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 220.88■□□□□ 0.932e-38■□□□□ 11
PRPF8Q6P2Q9 CAMKK2-215ENST00000544485 543 ntTSL 419.28■□□□□ 0.688e-12■□□□□ 11
PRPF8Q6P2Q9 SQSTM1-210ENST00000506042 921 ntTSL 218.18■□□□□ 0.55e-7■□□□□ 11
PRPF8Q6P2Q9 CD151-206ENST00000525333 561 ntTSL 416.85■□□□□ 0.295e-7■□□□□ 11
PRPF8Q6P2Q9 CAMKK2-214ENST00000543477 563 ntTSL 416.84■□□□□ 0.298e-12■□□□□ 11
PRPF8Q6P2Q9 TMEM259-207ENST00000589831 432 ntTSL 216.45■□□□□ 0.225e-7■□□□□ 11
PRPF8Q6P2Q9 DDR1-245ENST00000484556 1038 ntTSL 216.44■□□□□ 0.225e-7■□□□□ 11
PRPF8Q6P2Q9 HYPK-205ENST00000498605 933 ntTSL 215.6■□□□□ 0.095e-7■□□□□ 11
PRPF8Q6P2Q9 PCGF5-202ENST00000490164 973 ntTSL 215.23■□□□□ 0.035e-7■□□□□ 11
PRPF8Q6P2Q9 GIPC1-207ENST00000587811 1717 nt14.86□□□□□ -0.035e-7■□□□□ 11
PRPF8Q6P2Q9 DDX11-226ENST00000543756 613 ntTSL 314.36□□□□□ -0.115e-7■□□□□ 11
PRPF8Q6P2Q9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.125e-7■□□□□ 11
PRPF8Q6P2Q9 IKBKB-205ENST00000517812 523 ntTSL 313.78□□□□□ -0.25e-7■□□□□ 11
PRPF8Q6P2Q9 QTRT1-210ENST00000592254 539 ntTSL 313.39□□□□□ -0.274e-6■□□□□ 11
PRPF8Q6P2Q9 DDX11-207ENST00000535317 879 ntTSL 312.63□□□□□ -0.395e-7■□□□□ 11
PRPF8Q6P2Q9 CDK18-210ENST00000484080 1040 ntTSL 212.23□□□□□ -0.452e-6■□□□□ 11
PRPF8Q6P2Q9 IKBKB-211ENST00000519733 527 ntTSL 412.14□□□□□ -0.475e-7■□□□□ 11
PRPF8Q6P2Q9 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.11□□□□□ -0.475e-7■□□□□ 11
PRPF8Q6P2Q9 ENO3-204ENST00000519266 343 ntTSL 311.97□□□□□ -0.495e-7■□□□□ 11
PRPF8Q6P2Q9 ENO3-203ENST00000518972 584 ntTSL 411.69□□□□□ -0.545e-7■□□□□ 11
PRPF8Q6P2Q9 ZMIZ2-214ENST00000492558 382 ntTSL 311.6□□□□□ -0.555e-7■□□□□ 11
PRPF8Q6P2Q9 IKBKB-203ENST00000517388 577 ntTSL 411.59□□□□□ -0.555e-7■□□□□ 11
PRPF8Q6P2Q9 IKBKB-208ENST00000518647 1543 ntTSL 211.03□□□□□ -0.645e-7■□□□□ 11
PRPF8Q6P2Q9 KIAA0141-207ENST00000509110 712 ntTSL 211□□□□□ -0.655e-7■□□□□ 11
PRPF8Q6P2Q9 HYPK-204ENST00000497142 428 ntTSL 210.87□□□□□ -0.675e-7■□□□□ 11
PRPF8Q6P2Q9 TMEM256-202ENST00000575427 403 ntTSL 210.86□□□□□ -0.675e-7■□□□□ 11
PRPF8Q6P2Q9 DDX11-227ENST00000544652 400 ntTSL 510.84□□□□□ -0.675e-7■□□□□ 11
PRPF8Q6P2Q9 IKBKB-215ENST00000520320 628 ntTSL 510.79□□□□□ -0.685e-7■□□□□ 11
PRPF8Q6P2Q9 ENO3-205ENST00000519300 523 ntTSL 310.79□□□□□ -0.685e-7■□□□□ 11
PRPF8Q6P2Q9 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.73□□□□□ -0.695e-7■□□□□ 11
PRPF8Q6P2Q9 BMP1-207ENST00000517324 698 ntTSL 510.73□□□□□ -0.695e-7■□□□□ 11
PRPF8Q6P2Q9 RNF167-204ENST00000571365 535 ntTSL 210.69□□□□□ -0.75e-7■□□□□ 11
PRPF8Q6P2Q9 CORO1B-206ENST00000539970 220 ntTSL 310.64□□□□□ -0.715e-7■□□□□ 11
PRPF8Q6P2Q9 CDK18-223ENST00000515514 541 ntTSL 410.64□□□□□ -0.712e-6■□□□□ 11
PRPF8Q6P2Q9 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.715e-7■□□□□ 11
PRPF8Q6P2Q9 RAD52-212ENST00000541619 560 ntTSL 4 BASIC10.39□□□□□ -0.758e-12■□□□□ 11
PRPF8Q6P2Q9 RPS6KA3-204ENST00000474266 930 ntTSL 310.26□□□□□ -0.778e-12■□□□□ 11
PRPF8Q6P2Q9 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.775e-7■□□□□ 11
PRPF8Q6P2Q9 DDX11-203ENST00000415475 883 ntTSL 310.02□□□□□ -0.815e-7■□□□□ 11
PRPF8Q6P2Q9 FLCN-209ENST00000480316 786 ntTSL 29.81□□□□□ -0.845e-7■□□□□ 11
PRPF8Q6P2Q9 CDK18-220ENST00000512008 582 ntTSL 49.73□□□□□ -0.852e-6■□□□□ 11
PRPF8Q6P2Q9 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.895e-7■□□□□ 11
PRPF8Q6P2Q9 IGFL4-204ENST00000601672 667 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.95e-7■□□□□ 11
PRPF8Q6P2Q9 ARPC4-206ENST00000479956 506 ntTSL 49.38□□□□□ -0.915e-7■□□□□ 11
PRPF8Q6P2Q9 CD151-209ENST00000526439 713 ntTSL 29.23□□□□□ -0.935e-7■□□□□ 11
PRPF8Q6P2Q9 SLC7A2-206ENST00000640220 2068 ntTSL 1 (best)9.05□□□□□ -0.965e-7■□□□□ 11
PRPF8Q6P2Q9 ANKFY1-210ENST00000574736 570 ntTSL 48.88□□□□□ -0.995e-7■□□□□ 11
PRPF8Q6P2Q9 RAD52-217ENST00000544742 463 ntTSL 4 BASIC8.82□□□□□ -18e-12■□□□□ 11
PRPF8Q6P2Q9 NECAP1-223ENST00000640091 2115 ntTSL 28.38□□□□□ -1.075e-7■□□□□ 11
PRPF8Q6P2Q9 IPO7-207ENST00000533680 639 ntTSL 58.15□□□□□ -1.15e-7■□□□□ 11
PRPF8Q6P2Q9 PHLDB1-227ENST00000620788 5898 ntTSL 27.98□□□□□ -1.135e-7■□□□□ 11
PRPF8Q6P2Q9 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.175e-7■□□□□ 11
PRPF8Q6P2Q9 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.72□□□□□ -1.175e-7■□□□□ 11
PRPF8Q6P2Q9 GTF3C2-205ENST00000431028 592 ntTSL 37.57□□□□□ -1.25e-7■□□□□ 11
PRPF8Q6P2Q9 INVS-204ENST00000460636 954 ntTSL 57.07□□□□□ -1.285e-7■□□□□ 11
PRPF8Q6P2Q9 OGT-209ENST00000474633 564 ntTSL 25.98□□□□□ -1.455e-7■□□□□ 11
PRPF8Q6P2Q9 C5-203ENST00000466280 540 ntTSL 55.65□□□□□ -1.515e-7■□□□□ 11
PRPF8Q6P2Q9 IGFL4-203ENST00000596694 2719 ntTSL 25.25□□□□□ -1.575e-7■□□□□ 11
PRPF8Q6P2Q9 GNS-209ENST00000545273 906 ntTSL 54.99□□□□□ -1.615e-7■□□□□ 11
PRPF8Q6P2Q9 LAMC1-203ENST00000478064 782 ntTSL 53.53□□□□□ -1.845e-7■□□□□ 11
PRPF8Q6P2Q9 TMEM87A-206ENST00000563371 867 ntTSL 53.32□□□□□ -1.885e-7■□□□□ 11
PRPF8Q6P2Q9 TMEM183A-202ENST00000463015 755 ntTSL 23.04□□□□□ -1.925e-7■□□□□ 11
PRPF8Q6P2Q9 DICER1-210ENST00000532458 591 ntTSL 42.64□□□□□ -1.995e-7■□□□□ 11
PRPF8Q6P2Q9 NEDD4L-217ENST00000587246 406 ntTSL 51.48□□□□□ -2.175e-7■□□□□ 11
PRPF8Q6P2Q9 CUL3-210ENST00000484081 588 ntTSL 20.51□□□□□ -2.335e-7■□□□□ 11
PRPF8Q6P2Q9 TMEM87A-204ENST00000561578 528 ntTSL 40.05□□□□□ -2.45e-7■□□□□ 11
PRPF8Q6P2Q9 RFNG-212ENST00000584838 721 ntTSL 511.82□□□□□ -0.524e-8■□□□□ 11
PRPF8Q6P2Q9 IMMT-210ENST00000486633 631 ntTSL 210.75□□□□□ -0.691e-8■□□□□ 11
PRPF8Q6P2Q9 HDAC6-235ENST00000495515 569 ntTSL 314.15□□□□□ -0.143e-6■□□□□ 11
PRPF8Q6P2Q9 HDAC6-215ENST00000465457 563 ntTSL 512.15□□□□□ -0.463e-6■□□□□ 11
PRPF8Q6P2Q9 DLG1-225ENST00000477312 732 ntTSL 34.03□□□□□ -1.769e-9■□□□□ 11
PRPF8Q6P2Q9 AKR1C1-203ENST00000442997 744 ntTSL 38.81□□□□□ -11e-9■□□□□ 11
Retrieved 100 of 73,762 protein–RNA pairs in 606.1 ms