RNA–Protein interactions for RNA: ENST00000478064.1

LAMC1-203, Transcript of laminin subunit gamma 1, humanhuman

TSL 5

Gene LAMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1-203ENST00000478064 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
LAMC1-203ENST00000478064 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
LAMC1-203ENST00000478064 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
LAMC1-203ENST00000478064 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
LAMC1-203ENST00000478064 FOXD1Q16676 465 aa12.7□□□□□ -0.38
LAMC1-203ENST00000478064 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
LAMC1-203ENST00000478064 MSH5O43196 834 aa12.06□□□□□ -0.48
LAMC1-203ENST00000478064 PIAS4Q8N2W9 510 aaPredicted RBP11.86□□□□□ -0.51
LAMC1-203ENST00000478064 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
LAMC1-203ENST00000478064 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
LAMC1-203ENST00000478064 ADRA2BP18089 450 aa11.63□□□□□ -0.55
LAMC1-203ENST00000478064 DMRT2Q9Y5R5 561 aa10.76□□□□□ -0.69
LAMC1-203ENST00000478064 MAPK8IP2Q13387 824 aaPredicted RBP10.75□□□□□ -0.69
LAMC1-203ENST00000478064 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
LAMC1-203ENST00000478064 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
LAMC1-203ENST00000478064 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
LAMC1-203ENST00000478064 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
LAMC1-203ENST00000478064 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
LAMC1-203ENST00000478064 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
LAMC1-203ENST00000478064 CNKSR2Q8WXI2 1034 aa10.16□□□□□ -0.78
LAMC1-203ENST00000478064 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
LAMC1-203ENST00000478064 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
LAMC1-203ENST00000478064 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
LAMC1-203ENST00000478064 DNAJC5BQ9UF47 199 aa9.96□□□□□ -0.82
LAMC1-203ENST00000478064 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
LAMC1-203ENST00000478064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.83□□□□□ -0.842e-7■■■□□ 17.1
LAMC1-203ENST00000478064 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
LAMC1-203ENST00000478064 CAPN15O75808 1086 aa9.53□□□□□ -0.88
LAMC1-203ENST00000478064 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
LAMC1-203ENST00000478064 POTEHQ6S545 545 aa9.51□□□□□ -0.89
LAMC1-203ENST00000478064 DSG3P32926 999 aa9.48□□□□□ -0.89
LAMC1-203ENST00000478064 SPINK5Q9NQ38 1064 aaPredicted RBP9.47□□□□□ -0.89
LAMC1-203ENST00000478064 KCNA4P22459 653 aa9.41□□□□□ -0.9
LAMC1-203ENST00000478064 APLP2Q06481 763 aa9.35□□□□□ -0.91
LAMC1-203ENST00000478064 EHMT2Q96KQ7 1210 aa9.32□□□□□ -0.92
LAMC1-203ENST00000478064 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
LAMC1-203ENST00000478064 ZNF219Q9P2Y4 722 aaPredicted RBP9.29□□□□□ -0.92
LAMC1-203ENST00000478064 ABCB7O75027 752 aa9.26□□□□□ -0.93
LAMC1-203ENST00000478064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
LAMC1-203ENST00000478064 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
LAMC1-203ENST00000478064 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
LAMC1-203ENST00000478064 SAMD1Q6SPF0 538 aaPredicted RBP9.17□□□□□ -0.94
LAMC1-203ENST00000478064 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
LAMC1-203ENST00000478064 SLC4A1APQ9BWU0 796 aaKnown RBP9.09□□□□□ -0.95
LAMC1-203ENST00000478064 CCDC180Q9P1Z9 1646 aa9.05□□□□□ -0.96
LAMC1-203ENST00000478064 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
LAMC1-203ENST00000478064 POLA2Q14181 598 aa8.98□□□□□ -0.97
LAMC1-203ENST00000478064 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
LAMC1-203ENST00000478064 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
LAMC1-203ENST00000478064 AKT1S1Q96B36 256 aa8.83□□□□□ -1
LAMC1-203ENST00000478064 ZBTB12Q9Y330 459 aaPredicted RBP8.82□□□□□ -1
LAMC1-203ENST00000478064 SP7Q8TDD2 431 aaPredicted RBP8.79□□□□□ -1
LAMC1-203ENST00000478064 ABCC9O60706 1549 aa8.76□□□□□ -1.01
LAMC1-203ENST00000478064 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
LAMC1-203ENST00000478064 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
LAMC1-203ENST00000478064 ATF5Q9Y2D1 282 aaPredicted RBP8.71□□□□□ -1.02
LAMC1-203ENST00000478064 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
LAMC1-203ENST00000478064 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
LAMC1-203ENST00000478064 HAX1O00165 279 aa8.67□□□□□ -1.02
LAMC1-203ENST00000478064 ZBTB22O15209 634 aa8.66□□□□□ -1.02
LAMC1-203ENST00000478064 PITPNM1O00562 1244 aa8.63□□□□□ -1.03
LAMC1-203ENST00000478064 FXR2P51116 673 aaKnown RBP eCLIP8.6□□□□□ -1.039e-7■■■■□ 19.4
LAMC1-203ENST00000478064 FBLN2P98095 1184 aa8.5□□□□□ -1.05
LAMC1-203ENST00000478064 SPDYE2BA6NHP3 402 aa8.49□□□□□ -1.05
LAMC1-203ENST00000478064 SPDYE6P0CI01 402 aa8.49□□□□□ -1.05
LAMC1-203ENST00000478064 SPDYE2Q495Y8 402 aa8.49□□□□□ -1.05
LAMC1-203ENST00000478064 ATXN8OSP0DMR3 200 aa8.48□□□□□ -1.05
LAMC1-203ENST00000478064 DCAF8L2P0C7V8 631 aa8.47□□□□□ -1.05
LAMC1-203ENST00000478064 RB1CC1Q8TDY2 1594 aa8.47□□□□□ -1.05
LAMC1-203ENST00000478064 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
LAMC1-203ENST00000478064 NACADO15069 1562 aa8.44□□□□□ -1.06
LAMC1-203ENST00000478064 EVX2Q03828 476 aa8.44□□□□□ -1.06
LAMC1-203ENST00000478064 CLEC11AQ9Y240 323 aa8.44□□□□□ -1.06
LAMC1-203ENST00000478064 PRKAR2AP13861 404 aaKnown RBP8.43□□□□□ -1.06
LAMC1-203ENST00000478064 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
LAMC1-203ENST00000478064 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
LAMC1-203ENST00000478064 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
LAMC1-203ENST00000478064 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
LAMC1-203ENST00000478064 DCAF1Q9Y4B6 1507 aa8.37□□□□□ -1.07
LAMC1-203ENST00000478064 UNC13AQ9UPW8 1703 aa8.36□□□□□ -1.07
LAMC1-203ENST00000478064 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
LAMC1-203ENST00000478064 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
LAMC1-203ENST00000478064 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
LAMC1-203ENST00000478064 GABBR2O75899 941 aa8.29□□□□□ -1.08
LAMC1-203ENST00000478064 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
LAMC1-203ENST00000478064 RTN4Q9NQC3 1192 aaKnown RBP8.28□□□□□ -1.08
LAMC1-203ENST00000478064 PRR29P0C7W0 189 aa8.26□□□□□ -1.09
LAMC1-203ENST00000478064 CHADLQ6NUI6 762 aa8.26□□□□□ -1.09
LAMC1-203ENST00000478064 SCRIBQ14160 1630 aa8.25□□□□□ -1.09
LAMC1-203ENST00000478064 LHX8Q68G74 356 aa8.25□□□□□ -1.09
LAMC1-203ENST00000478064 PABPN1Q86U42 306 aaKnown RBP eCLIP8.21□□□□□ -1.1
LAMC1-203ENST00000478064 BICRAQ9NZM4 1560 aa8.19□□□□□ -1.1
LAMC1-203ENST00000478064 CD44P16070 742 aaKnown RBP8.15□□□□□ -1.1
LAMC1-203ENST00000478064 CLCN6P51797 869 aa8.13□□□□□ -1.11
LAMC1-203ENST00000478064 FKBP8Q14318 412 aa8.13□□□□□ -1.11
LAMC1-203ENST00000478064 FARP1Q9Y4F1 1045 aaPredicted RBP8.12□□□□□ -1.11
LAMC1-203ENST00000478064 SHROOM4Q9ULL8 1493 aa8.08□□□□□ -1.12
LAMC1-203ENST00000478064 DCBLD2Q96PD2 775 aa8.07□□□□□ -1.12
LAMC1-203ENST00000478064 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
LAMC1-203ENST00000478064 ZRANB1Q9UGI0 708 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms